RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 KRTAP19-4Q3LI73 84 aa8.5□□□□□ -1.05
VBP1-203ENST00000535916 ANKLE2Q86XL3 938 aa8.5□□□□□ -1.05
VBP1-203ENST00000535916 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
VBP1-203ENST00000535916 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
VBP1-203ENST00000535916 PCDHA11Q9Y5I1 949 aa8.5□□□□□ -1.05
VBP1-203ENST00000535916 MINDY4BA8MYZ0 360 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 NFIBO00712 420 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 DNAJA2O60884 412 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 ZGLP1P0C6A0 271 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 PDIA4P13667 645 aaKnown RBP8.49□□□□□ -1.05
VBP1-203ENST00000535916 SNAP47Q5SQN1 464 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 FBXO27Q8NI29 283 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 KREMEN1Q96MU8 473 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 RNF32Q9H0A6 362 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 C19orf44Q9H6X5 657 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
VBP1-203ENST00000535916 LCNL1Q6ZST4 164 aa8.48□□□□□ -1.05
VBP1-203ENST00000535916 GOLM1Q8NBJ4 401 aa8.48□□□□□ -1.05
VBP1-203ENST00000535916 SHISA3A0PJX4 238 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 GARTP22102 1010 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 LCE5AQ5TCM9 118 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 REC114Q7Z4M0 266 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 PHACTR4Q8IZ21 702 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 PDZD8Q8NEN9 1154 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 CCDC74BQ96LY2 380 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 KIF2CQ99661 725 aa8.47□□□□□ -1.05
VBP1-203ENST00000535916 TMEM253P0C7T8 217 aa8.46□□□□□ -1.06
VBP1-203ENST00000535916 PWP1Q13610 501 aa8.46□□□□□ -1.06
VBP1-203ENST00000535916 MPP2Q14168 576 aa8.46□□□□□ -1.06
VBP1-203ENST00000535916 ZSCAN18Q8TBC5 510 aaPredicted RBP8.46□□□□□ -1.06
VBP1-203ENST00000535916 ASPNQ9BXN1 380 aa8.46□□□□□ -1.06
VBP1-203ENST00000535916 RBM47A0AV96 593 aaKnown RBP8.45□□□□□ -1.06
VBP1-203ENST00000535916 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
VBP1-203ENST00000535916 TLR3O15455 904 aaKnown RBP8.45□□□□□ -1.06
VBP1-203ENST00000535916 CD320Q9NPF0 282 aa8.45□□□□□ -1.06
VBP1-203ENST00000535916 KBTBD4Q9NVX7 518 aa8.45□□□□□ -1.06
VBP1-203ENST00000535916 ETV2O00321 342 aaPredicted RBP8.44□□□□□ -1.06
VBP1-203ENST00000535916 TEKQ02763 1124 aa8.44□□□□□ -1.06
VBP1-203ENST00000535916 ATG14Q6ZNE5 492 aa8.44□□□□□ -1.06
VBP1-203ENST00000535916 FAM196AQ6ZSG2 479 aa8.44□□□□□ -1.06
VBP1-203ENST00000535916 OXR1Q8N573 874 aa8.44□□□□□ -1.06
VBP1-203ENST00000535916 DHX38Q92620 1227 aaKnown RBP8.44□□□□□ -1.06
VBP1-203ENST00000535916 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
VBP1-203ENST00000535916 EBF1Q9UH73 591 aa8.44□□□□□ -1.06
VBP1-203ENST00000535916 FITM1A5D6W6 292 aa8.43□□□□□ -1.06
VBP1-203ENST00000535916 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
VBP1-203ENST00000535916 ZSCAN22P10073 491 aaPredicted RBP8.43□□□□□ -1.06
VBP1-203ENST00000535916 GBP1P32455 592 aa8.43□□□□□ -1.06
VBP1-203ENST00000535916 ERMP1Q7Z2K6 904 aa8.43□□□□□ -1.06
VBP1-203ENST00000535916 LILRA2Q8N149 483 aa8.43□□□□□ -1.06
VBP1-203ENST00000535916 VWCEQ96DN2 955 aa8.43□□□□□ -1.06
VBP1-203ENST00000535916 TCAF2A6NFQ2 919 aa8.42□□□□□ -1.06
VBP1-203ENST00000535916 GLDCP23378 1020 aa8.42□□□□□ -1.06
VBP1-203ENST00000535916 KCNA10Q16322 511 aa8.42□□□□□ -1.06
VBP1-203ENST00000535916 CLEC16AQ2KHT3 1053 aa8.42□□□□□ -1.06
VBP1-203ENST00000535916 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
VBP1-203ENST00000535916 SLC26A8Q96RN1 970 aa8.42□□□□□ -1.06
VBP1-203ENST00000535916 UBOX5O94941 541 aa8.41□□□□□ -1.06
VBP1-203ENST00000535916 NR0B2Q15466 257 aa8.41□□□□□ -1.06
VBP1-203ENST00000535916 ARSHQ5FYA8 562 aa8.41□□□□□ -1.06
VBP1-203ENST00000535916 KCNN1Q92952 543 aa8.41□□□□□ -1.06
VBP1-203ENST00000535916 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
VBP1-203ENST00000535916 SLC22A31A6NKX4 558 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 RGS13O14921 159 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 CHMP4BP1P59074 171 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 NMIQ13287 307 aaPredicted RBP8.4□□□□□ -1.06
VBP1-203ENST00000535916 CWF19L2Q2TBE0 894 aaKnown RBP8.4□□□□□ -1.06
VBP1-203ENST00000535916 IRF2BP1Q8IU81 584 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 SIAH1Q8IUQ4 282 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 SLC6A17Q9H1V8 727 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 BRMS1Q9HCU9 246 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 GPR160Q9UJ42 338 aa8.4□□□□□ -1.06
VBP1-203ENST00000535916 SMG5Q9UPR3 1016 aaKnown RBP8.4□□□□□ -1.06
VBP1-203ENST00000535916 YBX2Q9Y2T7 364 aaKnown RBP8.4□□□□□ -1.06
VBP1-203ENST00000535916 ERCC3P19447 782 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 GALK1P51570 392 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 DUSP4Q13115 394 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 ZNF605Q86T29 641 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 ANKS4BQ8N8V4 417 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 INTS4Q96HW7 963 aaKnown RBP8.39□□□□□ -1.07
VBP1-203ENST00000535916 G6PC3Q9BUM1 346 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 HDAC8Q9BY41 377 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 LRRC3Q9BY71 257 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 CWC22Q9HCG8 908 aaKnown RBP8.39□□□□□ -1.07
VBP1-203ENST00000535916 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 PCDHB14Q9Y5E9 798 aa8.39□□□□□ -1.07
VBP1-203ENST00000535916 KRTAP9-7A8MTY7 169 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 RAG1P15918 1043 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
VBP1-203ENST00000535916 CHRNEQ04844 493 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 MLECQ14165 292 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 SPPL2CQ8IUH8 684 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 LINC01599Q8WXQ3 324 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 MCOLN1Q9GZU1 580 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 ASCC2Q9H1I8 757 aaPredicted RBP8.38□□□□□ -1.07
VBP1-203ENST00000535916 ZNF281Q9Y2X9 895 aa8.38□□□□□ -1.07
VBP1-203ENST00000535916 SUPT16HQ9Y5B9 1047 aaKnown RBP8.38□□□□□ -1.07
VBP1-203ENST00000535916 MYOCOSA0A1B0GUC4 107 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms