RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 RBPJLQ9UBG7 517 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 GABRQQ9UN88 632 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 RABGAP1Q9Y3P9 1069 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 RLFQ13129 1914 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 CCDC171Q6TFL3 1326 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 PARP14Q460N5 1801 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 SPDYE16A6NNV3 312 aaPredicted RBP16.43■□□□□ 0.22
TMEM258-203ENST00000535297 HIP1O00291 1037 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
TMEM258-203ENST00000535297 SDSP20132 328 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 GRK4P32298 578 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 FLT3LGP49771 235 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 MFAP1P55081 439 aaKnown RBP16.43■□□□□ 0.22
TMEM258-203ENST00000535297 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
TMEM258-203ENST00000535297 SLAIN1Q8ND83 568 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 SH3TC2Q8TF17 1288 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
TMEM258-203ENST00000535297 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 PRDM1O75626 825 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 MAPK4P31152 587 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 MLLT1Q03111 559 aaPredicted RBP16.42■□□□□ 0.22
TMEM258-203ENST00000535297 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 ZNF589Q86UQ0 364 aaPredicted RBP16.42■□□□□ 0.22
TMEM258-203ENST00000535297 TANGO6Q9C0B7 1094 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 GOPCQ9HD26 462 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 DIAPH3Q9NSV4 1193 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 NYAP2Q9P242 653 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
TMEM258-203ENST00000535297 PLXNB2O15031 1838 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 CNMDO75829 334 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 CCNA1P78396 465 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 PXYLP1Q8TE99 480 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 SYNPO2Q9UMS6 1093 aa16.41■□□□□ 0.22
TMEM258-203ENST00000535297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM258-203ENST00000535297 ADCY3O60266 1144 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 PEX10O60683 326 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 TSPY3P0CV98 308 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 TSPY8P0CW00 308 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
TMEM258-203ENST00000535297 COG2Q14746 738 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
TMEM258-203ENST00000535297 SPICE1Q8N0Z3 855 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 NEDD1Q8NHV4 660 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 SOCS4Q8WXH5 440 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
TMEM258-203ENST00000535297 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 FLOT1O75955 427 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 FGAP02671 866 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 GSPT1P15170 499 aaKnown RBP16.39■□□□□ 0.21
TMEM258-203ENST00000535297 UBXN2AP68543 259 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 Q3C1V9 767 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 PORCNQ9H237 461 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 MTMR4Q9NYA4 1195 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 BTBD7Q9P203 1132 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 GJD2Q9UKL4 321 aa16.39■□□□□ 0.21
TMEM258-203ENST00000535297 ORC4O43929 436 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 TTLL1O95922 423 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 DSG3P32926 999 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 CTDSPL2Q05D32 466 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
TMEM258-203ENST00000535297 GPR142Q7Z601 462 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 PLEKHH3Q7Z736 793 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 NUDT12Q9BQG2 462 aa16.38■□□□□ 0.21
TMEM258-203ENST00000535297 CENPFP49454 3210 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 FGRP09769 529 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 ELNP15502 786 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 TFAP4Q01664 338 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 MKL1Q969V6 931 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
TMEM258-203ENST00000535297 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
TMEM258-203ENST00000535297 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 ZNF236Q9UL36 1845 aa16.37■□□□□ 0.21
TMEM258-203ENST00000535297 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
TMEM258-203ENST00000535297 TSPY2A6NKD2 308 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 F5H6K3 240 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 RAD21O60216 631 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 NDUFB10O96000 172 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 INHAP05111 366 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 PCP11498 1178 aaKnown RBP16.36■□□□□ 0.21
TMEM258-203ENST00000535297 KLRC3Q07444 240 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 MTFR1Q15390 333 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 FAM83BQ5T0W9 1011 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 GMCL1P1Q8NEA9 526 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 SHCBP1Q8NEM2 672 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 RAD50Q92878 1312 aa16.36■□□□□ 0.21
TMEM258-203ENST00000535297 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
TMEM258-203ENST00000535297 HMGCRP04035 888 aa16.35■□□□□ 0.21
TMEM258-203ENST00000535297 XRCC5P13010 732 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms