RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
CDC27-208ENST00000532575 CCDC146Q8IYE0 955 aa10.6□□□□□ -0.71
CDC27-208ENST00000532575 VTI1AQ96AJ9 217 aa10.6□□□□□ -0.71
CDC27-208ENST00000532575 GCC1Q96CN9 775 aa10.6□□□□□ -0.71
CDC27-208ENST00000532575 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
CDC27-208ENST00000532575 MYO3BQ8WXR4 1341 aa10.59□□□□□ -0.71
CDC27-208ENST00000532575 CALD1Q05682 793 aaKnown RBP10.59□□□□□ -0.71
CDC27-208ENST00000532575 ARMC9Q7Z3E5 817 aa10.59□□□□□ -0.71
CDC27-208ENST00000532575 NLRP8Q86W28 1048 aa10.59□□□□□ -0.71
CDC27-208ENST00000532575 MYD88Q99836 296 aa10.59□□□□□ -0.71
CDC27-208ENST00000532575 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
CDC27-208ENST00000532575 GPC6Q9Y625 555 aaPredicted RBP10.59□□□□□ -0.71
CDC27-208ENST00000532575 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
CDC27-208ENST00000532575 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
CDC27-208ENST00000532575 TAF1P21675 1872 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 PAPPA2Q9BXP8 1791 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 FKTNO75072 461 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 GMPRP36959 345 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 INHBEP58166 350 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 RTN1Q16799 776 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 CFHR5Q9BXR6 569 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 BSDC1Q9NW68 430 aaPredicted RBP10.58□□□□□ -0.72
CDC27-208ENST00000532575 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.72
CDC27-208ENST00000532575 MED23Q9ULK4 1368 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 WNT10BO00744 389 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 NBPF9Q3BBW0 867 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 STRIP1Q5VSL9 837 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 APOBEC3FQ8IUX4 373 aaKnown RBP10.57□□□□□ -0.72
CDC27-208ENST00000532575 METTL22Q9BUU2 404 aaPredicted RBP10.57□□□□□ -0.72
CDC27-208ENST00000532575 ZCCHC2Q9C0B9 1178 aaKnown RBP10.57□□□□□ -0.72
CDC27-208ENST00000532575 COA1Q9GZY4 146 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 PHAXQ9H814 394 aaKnown RBP10.57□□□□□ -0.72
CDC27-208ENST00000532575 MBIPQ9NS73 344 aa10.57□□□□□ -0.72
CDC27-208ENST00000532575 POLR2AP24928 1970 aaKnown RBP10.57□□□□□ -0.72
CDC27-208ENST00000532575 MYBBP1AQ9BQG0 1328 aaKnown RBP10.57□□□□□ -0.72
CDC27-208ENST00000532575 CTSWP56202 376 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 GNAI1P63096 354 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 DACT2Q5SW24 774 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 PRAMEF18Q5VWM3 479 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 INTS3Q68E01 1043 aaKnown RBP10.56□□□□□ -0.72
CDC27-208ENST00000532575 FOXR1Q6PIV2 292 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 COL26A1Q96A83 441 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 HSH2DQ96JZ2 352 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
CDC27-208ENST00000532575 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 MINPP1Q9UNW1 487 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 LEMD3Q9Y2U8 911 aa10.56□□□□□ -0.72
CDC27-208ENST00000532575 MANSC4A6NHS7 340 aaPredicted RBP10.55□□□□□ -0.72
CDC27-208ENST00000532575 ZNF853P0CG23 659 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 SCNN1AP37088 669 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 CCT4P50991 539 aaKnown RBP10.55□□□□□ -0.72
CDC27-208ENST00000532575 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
CDC27-208ENST00000532575 NEXNQ0ZGT2 675 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 GAS6Q14393 721 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 RNFT1Q5M7Z0 435 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 TTLL5Q6EMB2 1281 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 FIGNL1Q6PIW4 674 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 TTLL11Q8NHH1 800 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 JARID2Q92833 1246 aaPredicted RBP10.55□□□□□ -0.72
CDC27-208ENST00000532575 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 TRERF1Q96PN7 1200 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.55□□□□□ -0.724e-7■■■■■ 33.5
CDC27-208ENST00000532575 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
CDC27-208ENST00000532575 SCAF8Q9UPN6 1271 aaKnown RBP10.55□□□□□ -0.72
CDC27-208ENST00000532575 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
CDC27-208ENST00000532575 ATXN7O15265 892 aaPredicted RBP10.54□□□□□ -0.72
CDC27-208ENST00000532575 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
CDC27-208ENST00000532575 KRT76Q01546 638 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 ZNF280CQ8ND82 737 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 MYO19Q96H55 970 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 ANKRD2Q9GZV1 360 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 LRFN2Q9ULH4 789 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
CDC27-208ENST00000532575 ADAMTS8Q9UP79 889 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 PCDHGC4Q9Y5F7 938 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
CDC27-208ENST00000532575 COL4A1P02462 1669 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 BNIP3LO60238 219 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 SASH1O94885 1247 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 PRKG1Q13976 671 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 NAA30Q147X3 362 aaPredicted RBP10.53□□□□□ -0.72
CDC27-208ENST00000532575 SAMD5Q5TGI4 173 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 KSR2Q6VAB6 950 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 KIAA0825Q8IV33 1275 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 ABHD17AQ96GS6 310 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 MPHOSPH8Q99549 860 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 MXD3Q9BW11 206 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 SAP130Q9H0E3 1048 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 GREM2Q9H772 168 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
CDC27-208ENST00000532575 MAP3K2Q9Y2U5 619 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms