RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 NEK1Q96PY6 1258 aa13.91□□□□□ -0.18
PPFIA1-220ENST00000532024 PARK7Q99497 189 aaKnown RBP13.91□□□□□ -0.18
PPFIA1-220ENST00000532024 MTA3Q9BTC8 594 aa13.91□□□□□ -0.18
PPFIA1-220ENST00000532024 KAT14Q9H8E8 782 aa13.91□□□□□ -0.18
PPFIA1-220ENST00000532024 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
PPFIA1-220ENST00000532024 TACC3Q9Y6A5 838 aa13.91□□□□□ -0.18
PPFIA1-220ENST00000532024 TNKSO95271 1327 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 A0A1W2PRG0 241 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 PDHXO00330 501 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 IFIT3O14879 490 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 WDR46O15213 610 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 NMT2O60551 498 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 OSBPP22059 807 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 ANAPC15P60006 121 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 FGD1P98174 961 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 STOX1Q6ZVD7 989 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 LRRC47Q8N1G4 583 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 KCNB2Q92953 911 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 TMEM87BQ96K49 555 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 ZIC5Q96T25 663 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 ZKSCAN3Q9BRR0 538 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 IL17RBQ9NRM6 502 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 TAF6LQ9Y6J9 622 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
PPFIA1-220ENST00000532024 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 BTBD19C9JJ37 291 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 IGF2BP3O00425 579 aaKnown RBP eCLIP13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 PRC1O43663 620 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 VCAM1P19320 739 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 WTAPQ15007 396 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 TMTC2Q8N394 836 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 JAKMIP1Q96N16 626 aaKnown RBP13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 TANGO6Q9C0B7 1094 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
PPFIA1-220ENST00000532024 F5H6K3 240 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 NOVP48745 357 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 KLRC3Q07444 240 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 MOGSQ13724 837 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 SPICE1Q8N0Z3 855 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 GTF3C2Q8WUA4 911 aaPredicted RBP13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 PTPN18Q99952 460 aa13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 RPAP3Q9H6T3 665 aaPredicted RBP13.88□□□□□ -0.19
PPFIA1-220ENST00000532024 TRPA1O75762 1119 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 NDUFB10O96000 172 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 CASTP20810 708 aaKnown RBP13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 SLC1A4P43007 532 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 TREML2Q5T2D2 321 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 SLFN13Q68D06 897 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 RCSD1Q6JBY9 416 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 DCAF4Q8WV16 495 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 ANKS1AQ92625 1134 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 TMEM47Q9BQJ4 181 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 WBP1LQ9NX94 342 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 RNF186Q9NXI6 227 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
PPFIA1-220ENST00000532024 CCDC69A6NI79 296 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 BMP3P12645 472 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 DGKZQ13574 1117 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 CCDC96Q2M329 555 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 SYNE3Q6ZMZ3 975 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 CHST3Q7LGC8 479 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 CFHR5Q9BXR6 569 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 ASCC2Q9H1I8 757 aaPredicted RBP13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 MYPNQ86TC9 1320 aa13.86□□□□□ -0.19
PPFIA1-220ENST00000532024 FLOT1O75955 427 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms