RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 CNGA1P29973 690 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 CDK8P49336 464 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 ICA1Q05084 483 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 PLS1Q14651 629 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 COG2Q14746 738 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 UBE3CQ15386 1083 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 MFSD14CQ5VZR4 134 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 TSHZ3Q63HK5 1081 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 PUS7LQ9H0K6 701 aaKnown RBP15.64■□□□□ 0.09
CPSF1-204ENST00000529288 ECHDC1Q9NTX5 307 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 HOXC10Q9NYD6 342 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 STAP2Q9UGK3 403 aa15.64■□□□□ 0.09
CPSF1-204ENST00000529288 ZMYND8Q9ULU4 1186 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-204ENST00000529288 SLC15A5A6NIM6 579 aa15.63■□□□□ 0.09
CPSF1-204ENST00000529288 KIAA1755Q5JYT7 1200 aa15.63■□□□□ 0.09
CPSF1-204ENST00000529288 MAP3K21Q5TCX8 1036 aa15.63■□□□□ 0.09
CPSF1-204ENST00000529288 C12orf60Q5U649 245 aa15.63■□□□□ 0.09
CPSF1-204ENST00000529288 GPATCH3Q96I76 525 aa15.63■□□□□ 0.09
CPSF1-204ENST00000529288 OGDHLQ9ULD0 1010 aa15.63■□□□□ 0.09
CPSF1-204ENST00000529288 FLOT1O75955 427 aa15.62■□□□□ 0.09
CPSF1-204ENST00000529288 DPP9Q86TI2 863 aa15.62■□□□□ 0.09
CPSF1-204ENST00000529288 MOV10L1Q9BXT6 1211 aaKnown RBP15.62■□□□□ 0.09
CPSF1-204ENST00000529288 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
CPSF1-204ENST00000529288 FLRT1Q9NZU1 646 aa15.62■□□□□ 0.09
CPSF1-204ENST00000529288 SYN1P17600 705 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 CTR9Q6PD62 1173 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 LBX2Q6XYB7 198 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 NCAPG2Q86XI2 1143 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 SIAH1Q8IUQ4 282 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 NPLOC4Q8TAT6 608 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 CCDC17Q96LX7 622 aa15.61■□□□□ 0.09
CPSF1-204ENST00000529288 DOCK3Q8IZD9 2030 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 MINDY4BA8MYZ0 360 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 EEF2P13639 858 aaKnown RBP15.6■□□□□ 0.09
CPSF1-204ENST00000529288 ERCC3P19447 782 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 DSG3P32926 999 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 CYP2C19P33261 490 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 MNX1P50219 401 aaPredicted RBP15.6■□□□□ 0.09
CPSF1-204ENST00000529288 C16orf86Q6ZW13 317 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 ATG4CQ96DT6 458 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 SPATC1LQ9H0A9 340 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 DCTPP1Q9H773 170 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 VCPKMTQ9H867 229 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 TMX2Q9Y320 296 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 NAV1Q8NEY1 1877 aa15.6■□□□□ 0.09
CPSF1-204ENST00000529288 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-204ENST00000529288 APPP05067 770 aa15.59■□□□□ 0.09
CPSF1-204ENST00000529288 ADORA2AP29274 412 aa15.59■□□□□ 0.09
CPSF1-204ENST00000529288 GRB14Q14449 540 aa15.59■□□□□ 0.09
CPSF1-204ENST00000529288 LHX8Q68G74 356 aa15.59■□□□□ 0.09
CPSF1-204ENST00000529288 LPAR1Q92633 364 aa15.59■□□□□ 0.09
CPSF1-204ENST00000529288 STRBPQ96SI9 672 aaKnown RBP15.59■□□□□ 0.09
CPSF1-204ENST00000529288 MKNK2Q9HBH9 465 aa15.59■□□□□ 0.09
CPSF1-204ENST00000529288 RNF113AO15541 343 aaKnown RBP15.58■□□□□ 0.08
CPSF1-204ENST00000529288 KBTBD3Q8NAB2 608 aa15.58■□□□□ 0.08
CPSF1-204ENST00000529288 OSBP2Q969R2 916 aa15.58■□□□□ 0.08
CPSF1-204ENST00000529288 KANSL2Q9H9L4 492 aa15.58■□□□□ 0.08
CPSF1-204ENST00000529288 ARPP21Q9UBL0 812 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-204ENST00000529288 PLXNB2O15031 1838 aa15.58■□□□□ 0.08
CPSF1-204ENST00000529288 WDR46O15213 610 aaKnown RBP15.57■□□□□ 0.08
CPSF1-204ENST00000529288 TDO2P48775 406 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 ANO1Q5XXA6 986 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 MB21D1Q8N884 522 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 APPBP2Q92624 585 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 SENP6Q9GZR1 1112 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-204ENST00000529288 PRO3102Q9H379 93 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 FBXO28Q9NVF7 368 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 DDX20Q9UHI6 824 aaKnown RBP15.57■□□□□ 0.08
CPSF1-204ENST00000529288 PFASO15067 1338 aa15.57■□□□□ 0.08
CPSF1-204ENST00000529288 DDX60LQ5H9U9 1706 aaKnown RBP15.57■□□□□ 0.08
CPSF1-204ENST00000529288 GSG1L2A8MUP6 293 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 STRNO43815 780 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 HOXC6P09630 235 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 SLC4A3P48751 1232 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 FAM83BQ5T0W9 1011 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 SHCBP1Q8NEM2 672 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 MROH8Q9H579 483 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 SLC5A4Q9NY91 659 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 PCDHB15Q9Y5E8 787 aa15.56■□□□□ 0.08
CPSF1-204ENST00000529288 M0R2C6 588 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 GPAA1O43292 621 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 COBLO75128 1261 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 FCER1AP12319 257 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 ATN1P54259 1190 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-204ENST00000529288 TMEM132BQ14DG7 1078 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 LRRC26Q2I0M4 334 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 PRAMEF19Q5SWL8 479 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 TRPV1Q8NER1 839 aa15.55■□□□□ 0.08
CPSF1-204ENST00000529288 NUP88Q99567 741 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-204ENST00000529288 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-204ENST00000529288 MSCO60682 206 aa15.54■□□□□ 0.08
CPSF1-204ENST00000529288 PRDM1O75626 825 aa15.54■□□□□ 0.08
CPSF1-204ENST00000529288 ZFYP08048 801 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-204ENST00000529288 COL6A1P12109 1028 aa15.54■□□□□ 0.08
CPSF1-204ENST00000529288 RASA1P20936 1047 aa15.54■□□□□ 0.08
CPSF1-204ENST00000529288 MAGEA10P43363 369 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-204ENST00000529288 LRRFIP1Q32MZ4 808 aaKnown RBP15.54■□□□□ 0.08
CPSF1-204ENST00000529288 SBK1Q52WX2 424 aa15.54■□□□□ 0.08
CPSF1-204ENST00000529288 GJC2Q5T442 439 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms