RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 BMP2KQ9NSY1 1161 aaPredicted RBP12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
SH2D4A-202ENST00000518040 A0A1B0GUL7 405 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 GDF11O95390 407 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 ITGB8P26012 769 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 ADORA2AP29274 412 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 JAG1P78504 1218 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 SHCBP1Q8NEM2 672 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 KIAA1683Q9H0B3 1180 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 DNAJC18Q9H819 358 aa12.11□□□□□ -0.47
SH2D4A-202ENST00000518040 RARBP10826 455 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 TIE1P35590 1138 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 PPP4CP60510 307 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 PPIGQ13427 754 aaKnown RBP eCLIP12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 RAB30Q15771 203 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 CCDC129Q6ZRS4 1044 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 ABRAQ8N0Z2 381 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 PRDM12Q9H4Q4 367 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 HOXC10Q9NYD6 342 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 HMG20BQ9P0W2 317 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 BTBD7Q9P203 1132 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 LRP2BPQ9P2M1 347 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 PQBP1O60828 265 aaKnown RBP12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 TIMP1P01033 207 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 VCAM1P19320 739 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 GORABQ5T7V8 394 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 TGFBRAP1Q8WUH2 860 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 PBX4Q9BYU1 374 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 MSRAQ9UJ68 235 aa12.1□□□□□ -0.47
SH2D4A-202ENST00000518040 FLT1P17948 1338 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 GH2P01242 217 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 NUP133Q8WUM0 1156 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 TSEN34Q9BSV6 310 aaKnown RBP12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 MROH8Q9H579 483 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 AATFQ9NY61 560 aaKnown RBP eCLIP12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 MROH7Q68CQ1 1323 aa12.09□□□□□ -0.47
SH2D4A-202ENST00000518040 BDP1A6H8Y1 2624 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 IGFBP4P22692 258 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 ARID4AP29374 1257 aaPredicted RBP12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 COG2Q14746 738 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 MFSD5Q6N075 450 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 PSRC1Q6PGN9 363 aaPredicted RBP12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 TBC1D9Q6ZT07 1266 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 CERS3Q8IU89 383 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 NEUROD6Q96NK8 337 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.482e-7■□□□□ 9.3
SH2D4A-202ENST00000518040 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 MTIF3Q9H2K0 278 aaKnown RBP12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
SH2D4A-202ENST00000518040 BMP1P13497 986 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 CCDC85BQ15834 202 aaPredicted RBP12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 RASIP1Q5U651 963 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 TATDN1Q6P1N9 297 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 LRFN3Q9BTN0 628 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 SPATC1LQ9H0A9 340 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 RPAP3Q9H6T3 665 aaPredicted RBP12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
SH2D4A-202ENST00000518040 COBLO75128 1261 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 ERCC3P19447 782 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 RAB3GAP1Q15042 981 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 TMEM199Q8N511 208 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 SLC28A3Q9HAS3 691 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 STARD7Q9NQZ5 370 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 MOXD2PA6NHM9 499 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 PBX2P40425 430 aa12.06□□□□□ -0.48
SH2D4A-202ENST00000518040 TFCP2Q12800 502 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms