RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 TUBB4AP04350 444 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
PHF3-212ENST00000515594 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
PHF3-212ENST00000515594 KRT31Q15323 416 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 FAM47AQ5JRC9 791 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 RASGRP4Q8TDF6 673 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 CNNM2Q9H8M5 875 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 ADAM21Q9UKJ8 722 aa14.65□□□□□ -0.06
PHF3-212ENST00000515594 N4BP3O15049 544 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 ALX1Q15699 326 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 RRAGBQ5VZM2 374 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 PIK3AP1Q6ZUJ8 805 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 PLEKHA4Q9H4M7 779 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 DACH1Q9UI36 760 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 PP2D1A8MPX8 630 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 ANKRD65E5RJM6 399 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 KIF5CO60282 957 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 SRGAP2O75044 1071 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 ZMYND10O75800 440 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 IL17AQ16552 155 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 FOXR1Q6PIV2 292 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 SRGAP1Q7Z6B7 1085 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 NUP88Q99567 741 aaPredicted RBP14.64□□□□□ -0.07
PHF3-212ENST00000515594 CARD10Q9BWT7 1032 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 PAPPAQ13219 1627 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 TRIM66O15016 1216 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 PBX1P40424 430 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 SEC23AQ15436 765 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
PHF3-212ENST00000515594 NACAP1Q9BZK3 213 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 CALCOCO1Q9P1Z2 691 aa14.64□□□□□ -0.07
PHF3-212ENST00000515594 NUP98P52948 1817 aa14.63□□□□□ -0.07
PHF3-212ENST00000515594 DHX8Q14562 1220 aaKnown RBP14.63□□□□□ -0.07
PHF3-212ENST00000515594 NPY5RQ15761 445 aa14.63□□□□□ -0.07
PHF3-212ENST00000515594 CDKAL1Q5VV42 579 aa14.63□□□□□ -0.07
PHF3-212ENST00000515594 TAF3Q5VWG9 929 aa14.63□□□□□ -0.07
PHF3-212ENST00000515594 KRT2P35908 639 aa14.63□□□□□ -0.07
PHF3-212ENST00000515594 GUCA1BQ9UMX6 200 aa14.63□□□□□ -0.07
PHF3-212ENST00000515594 NKRFO15226 690 aaKnown RBP eCLIP14.62□□□□□ -0.07
PHF3-212ENST00000515594 BEND6Q5SZJ8 279 aaPredicted RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 PANX2Q96RD6 677 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 PHF20Q9BVI0 1012 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 CDC23Q9UJX2 597 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 GOLGA6L9A6NEM1 432 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 ERCC5P28715 1186 aaPredicted RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 PMS1P54277 932 aaKnown RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 MRPS25P82663 173 aaKnown RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 FUT2Q10981 343 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 IFIT1BQ5T764 474 aaKnown RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 SLC51AQ86UW1 340 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 GSPT2Q8IYD1 628 aaKnown RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
PHF3-212ENST00000515594 FAN1Q9Y2M0 1017 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 CYP2D6P10635 497 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 ZSCAN26Q16670 478 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 TTC38Q5R3I4 469 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 ZNF579Q8NAF0 562 aaKnown RBP14.62□□□□□ -0.07
PHF3-212ENST00000515594 GPKOWQ92917 476 aaPredicted RBP eCLIP14.62□□□□□ -0.07
PHF3-212ENST00000515594 CAPZA3Q96KX2 299 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
PHF3-212ENST00000515594 ERCC3P19447 782 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 KLRK1P26718 216 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 KRT9P35527 623 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 CHRNDQ07001 517 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 JAKMIP3Q5VZ66 844 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 SH3RF1Q7Z6J0 888 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 SRBD1Q8N5C6 995 aaKnown RBP14.61□□□□□ -0.07
PHF3-212ENST00000515594 TRIML1Q8N9V2 468 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 ZNF384Q8TF68 577 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 ABHD10Q9NUJ1 306 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 TPM1P09493 284 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 ARHGAP25P42331 645 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 KCNQ4P56696 695 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
PHF3-212ENST00000515594 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 RASGRP2Q7LDG7 609 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 CCDC24Q8N4L8 307 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 CEP131Q9UPN4 1083 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 REXO2Q9Y3B8 237 aaKnown RBP14.61□□□□□ -0.07
PHF3-212ENST00000515594 MYH13Q9UKX3 1938 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 MROH5Q6ZUA9 1318 aa14.61□□□□□ -0.07
PHF3-212ENST00000515594 CTAGE9A4FU28 777 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 KLK7P49862 253 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 RIN2Q8WYP3 895 aaPredicted RBP14.6□□□□□ -0.07
PHF3-212ENST00000515594 ACSBG1Q96GR2 724 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 ZSCAN10Q96SZ4 725 aaPredicted RBP14.6□□□□□ -0.07
PHF3-212ENST00000515594 MAGEB6P1A0A0J9YX57 407 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 CCDC196A0A1B0GTZ2 297 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 CCDC151A5D8V7 595 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 NELFBQ8WX92 580 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 CCDC102AQ96A19 550 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 LRRIQ3A6PVS8 624 aaPredicted RBP14.6□□□□□ -0.07
PHF3-212ENST00000515594 MYO1BO43795 1136 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 UBXN1Q04323 297 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 C10orf67Q8IYJ2 551 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 ESR2Q92731 530 aa14.6□□□□□ -0.07
PHF3-212ENST00000515594 RNF26Q9BY78 433 aaPredicted RBP14.6□□□□□ -0.07
PHF3-212ENST00000515594 USP17L12C9JPN9 530 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms