RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ZNF609	O15014	1411 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	POLR2D	O15514	142 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	EXOSC10	Q01780	885 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	NNT	Q13423	1086 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	CCDC121	Q6ZUS5	278 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	CNGA4	Q8IV77	575 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	TSEN2	Q8NCE0	465 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	CHP1	Q99653	195 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	TPX2	Q9ULW0	747 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582		E7EVH7	732 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	NBPF14	Q5TI25	921 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	PPAN	Q9NQ55	473 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	SERTAD1	Q9UHV2	236 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	SH3BP1	Q9Y3L3	701 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	KLHL33	A6NCF5	533 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	TMCO5B	A8MYB1	307 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	PDE2A	O00408	941 aa	Predicted RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	HSF2BP	O75031	334 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	PPARA	Q07869	468 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	ACCSL	Q4AC99	568 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	LRRC24	Q50LG9	513 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	VPS37D	Q86XT2	251 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	THOC1	Q96FV9	657 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	PUS3	Q9BZE2	481 aa	Known RBP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	GCKR	Q14397	625 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	TNNI3K	Q59H18	835 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	CCDC122	Q5T0U0	273 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	RESP18	Q5W5W9	173 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	CMTR1	Q8N1G2	835 aa	Known RBP	12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZNF274	Q96GC6	653 aa	Predicted RBP	12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	CCT8L2	Q96SF2	557 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	DACH1	Q9UI36	760 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	FPGT-TNNI3K	V9GXZ4	949 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	hCG_1642624	A0A1W2PR95	340 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	MINDY4B	A8MYZ0	360 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	BACH1	O14867	736 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	CASP1	P29466	404 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	4e-8	■■■■□ 23.8
PDCD6-210	ENST00000513582	SNX1	Q13596	522 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	SPRED3	Q2MJR0	410 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	FILIP1L	Q4L180	1135 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	TMTC1	Q8IUR5	882 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	MLKL	Q8NB16	471 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	PSMB7	Q99436	277 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	VPS16	Q9H269	839 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	SEC31B	Q9NQW1	1179 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	IRAK4	Q9NWZ3	460 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	CPSF2	Q9P2I0	782 aa	Known RBP	12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	DMGDH	Q9UI17	866 aa	Known RBP	12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	TBC1D2B	Q9UPU7	963 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	RIPOR2	Q9Y4F9	1068 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	C3	P01024	1663 aa		12.47	□□□□□ -0.41
PDCD6-210	ENST00000513582	TARSL2	A2RTX5	802 aa	Known RBP	12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	NUTM2E	B1AL46	878 aa	Predicted RBP	12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	SNAP23	O00161	211 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	GRIN1	Q05586	938 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	ARMC3	Q5W041	872 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	CCDC70	Q6NSX1	233 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	FUK	Q8N0W3	1084 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	EPN3	Q9H201	632 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	ABHD10	Q9NUJ1	306 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	PAG1	Q9NWQ8	432 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	FAM208A	Q9UK61	1670 aa	Known RBP	12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	HPD	P32754	393 aa	Predicted RBP	12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	KRT9	P35527	623 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	CYP26C1	Q6V0L0	522 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	IFNL2	Q8IZJ0	200 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	AEN	Q8WTP8	325 aa	Known RBP	12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	LRRC1	Q9BTT6	524 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	BABAM1	Q9NWV8	329 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	MYO1A	Q9UBC5	1043 aa		12.46	□□□□□ -0.41
PDCD6-210	ENST00000513582	SNRPA1	P09661	255 aa	Known RBP	12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	GRIK3	Q13003	919 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	LDHAL6A	Q6ZMR3	332 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	NLRP14	Q86W24	1093 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	SPATS2	Q86XZ4	545 aa	Known RBP	12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	SYNE4	Q8N205	404 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	PHKB	Q93100	1093 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	BAIAP2L1	Q9UHR4	511 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	JAG2	Q9Y219	1238 aa		12.46	□□□□□ -0.42
PDCD6-210	ENST00000513582	N4BP3	O15049	544 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	RAD21	O60216	631 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	AFM	P43652	599 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	KCNB1	Q14721	858 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	GPIHBP1	Q8IV16	184 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	RSRC1	Q96IZ7	334 aa	Known RBP	12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	ZMYM6	O95789	1325 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	JCAD	Q9P266	1359 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	NRK	Q7Z2Y5	1582 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	MACROD2	A1Z1Q3	448 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	NEURL1B	A8MQ27	555 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	ADAMTS2	O95450	1211 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	CKAP4	Q07065	602 aa	Known RBP	12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	IMMT	Q16891	758 aa	Known RBP	12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	MYCBPAP	Q8TBZ2	947 aa		12.45	□□□□□ -0.42
PDCD6-210	ENST00000513582	ZIM3	Q96PE6	472 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms