RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 COA7Q96BR5 231 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 GJD2Q9UKL4 321 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 SPDYE16A6NNV3 312 aaPredicted RBP13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 PRDM1O75626 825 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 SDSP20132 328 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 IRF5Q13568 498 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 ALX1Q15699 326 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 ZNF589Q86UQ0 364 aaPredicted RBP13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 LPAR1Q92633 364 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 SH2D4AQ9H788 454 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 RABGAP1Q9Y3P9 1069 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
SH3RF1-205ENST00000511421 ADCY3O60266 1144 aa13.84□□□□□ -0.19
SH3RF1-205ENST00000511421 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
SH3RF1-205ENST00000511421 SPICE1Q8N0Z3 855 aa13.84□□□□□ -0.19
SH3RF1-205ENST00000511421 PORCNQ9H237 461 aa13.84□□□□□ -0.19
SH3RF1-205ENST00000511421 ZNF287Q9HBT7 754 aa13.84□□□□□ -0.19
SH3RF1-205ENST00000511421 ATP2B2Q01814 1243 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 PDE4BQ07343 736 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 COG2Q14746 738 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 MTFR1Q15390 333 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 PXYLP1Q8TE99 480 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 TACC3Q9Y6A5 838 aa13.83□□□□□ -0.2
SH3RF1-205ENST00000511421 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 MYCP01106 439 aaPredicted RBP13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 FGAP02671 866 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 SLC3A2P08195 630 aaKnown RBP13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 HSPD1P10809 573 aaKnown RBP13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 ELNP15502 786 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 MAPK4P31152 587 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 TANGO6Q9C0B7 1094 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 ANAPC4Q9UJX5 808 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 BRCA2P51587 3418 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 EN2P19622 333 aaPredicted RBP13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 DSG3P32926 999 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 FAM47AQ5JRC9 791 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 NEDD1Q8NHV4 660 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 GOPCQ9HD26 462 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 MTMR4Q9NYA4 1195 aa13.82□□□□□ -0.2
SH3RF1-205ENST00000511421 PLIN4Q96Q06 1357 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 RLFQ13129 1914 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 FGRP09769 529 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 TTC22Q5TAA0 569 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 GPR142Q7Z601 462 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 USP6NLQ92738 828 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 MKL1Q969V6 931 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 ZMYM6O95789 1325 aa13.81□□□□□ -0.2
SH3RF1-205ENST00000511421 FLOT1O75955 427 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 UBXN2AP68543 259 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 CCNA1P78396 465 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 TFAP4Q01664 338 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 MORN1Q5T089 497 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 CWC27Q6UX04 472 aaKnown RBP13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 PLEKHH3Q7Z736 793 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 ATG4CQ96DT6 458 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 NUDT12Q9BQG2 462 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 BIN2Q9UBW5 565 aaPredicted RBP13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 RBBP6Q7Z6E9 1792 aaKnown RBP13.8□□□□□ -0.2
SH3RF1-205ENST00000511421 F5H6K3 240 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 HIP1O00291 1037 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 ORC4O43929 436 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 NDUFB10O96000 172 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 INHAP05111 366 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 TSPY3P0CV98 308 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 TSPY8P0CW00 308 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 CCL5P13501 91 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 KLRC3Q07444 240 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 MB21D1Q8N884 522 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 FBXO28Q9NVF7 368 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 TTLL1O95922 423 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 CYP2B6P20813 491 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 MFAP1P55081 439 aaKnown RBP13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 CCAR1Q8IX12 1150 aaKnown RBP13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 MOV10L1Q9BXT6 1211 aaKnown RBP13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 SPATC1LQ9H0A9 340 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 UNC93B1Q9H1C4 597 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 SYNPO2Q9UMS6 1093 aa13.79□□□□□ -0.2
SH3RF1-205ENST00000511421 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms