RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 NF2P35240 595 aa13.64□□□□□ -0.23
SCG5-209ENST00000498607 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
SCG5-209ENST00000498607 ZNF526Q8TF50 670 aaPredicted RBP13.64□□□□□ -0.23
SCG5-209ENST00000498607 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
SCG5-209ENST00000498607 CDCA5Q96FF9 252 aa13.64□□□□□ -0.23
SCG5-209ENST00000498607 KAT14Q9H8E8 782 aa13.64□□□□□ -0.23
SCG5-209ENST00000498607 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
SCG5-209ENST00000498607 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
SCG5-209ENST00000498607 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
SCG5-209ENST00000498607 ASNSP08243 561 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 JAG1P78504 1218 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 ICA1Q05084 483 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 STK3Q13188 491 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 SEPT2Q15019 361 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 CATIPQ7Z7H3 387 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 MICU3Q86XE3 530 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 CLEC10AQ8IUN9 316 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 NECAB1Q8N987 351 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 PNMA1Q8ND90 353 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 CHMP4CQ96CF2 233 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
SCG5-209ENST00000498607 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
SCG5-209ENST00000498607 GOLGA8AA7E2F4 631 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 CALM1P0DP23 149 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 CALM2P0DP24 149 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 CALM3P0DP25 149 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
SCG5-209ENST00000498607 INPP5BP32019 993 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 METAP2P50579 478 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCG5-209ENST00000498607 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
SCG5-209ENST00000498607 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
SCG5-209ENST00000498607 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 MYL10Q9BUA6 226 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 SYNPO2Q9UMS6 1093 aa13.62□□□□□ -0.23
SCG5-209ENST00000498607 DHX16O60231 1041 aaKnown RBP13.61□□□□□ -0.23
SCG5-209ENST00000498607 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
SCG5-209ENST00000498607 EEF2P13639 858 aaKnown RBP13.61□□□□□ -0.23
SCG5-209ENST00000498607 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
SCG5-209ENST00000498607 SCRN1Q12765 414 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 TROAPQ12815 778 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 DLK2Q6UY11 383 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 MKL1Q969V6 931 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
SCG5-209ENST00000498607 ARHGEF10LQ9HCE6 1279 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.61□□□□□ -0.23
SCG5-209ENST00000498607 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
SCG5-209ENST00000498607 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 CCDC196A0A1B0GTZ2 297 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 USP2O75604 605 aaPredicted RBP13.6□□□□□ -0.23
SCG5-209ENST00000498607 RXRAP19793 462 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 IREB2P48200 963 aaKnown RBP13.6□□□□□ -0.23
SCG5-209ENST00000498607 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 RTN1Q16799 776 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 SCYL3Q8IZE3 742 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 LRRC47Q8N1G4 583 aaKnown RBP13.6□□□□□ -0.23
SCG5-209ENST00000498607 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCG5-209ENST00000498607 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 LLPHQ9BRT6 129 aaKnown RBP13.6□□□□□ -0.23
SCG5-209ENST00000498607 GPBP1L1Q9HC44 474 aaPredicted RBP13.6□□□□□ -0.23
SCG5-209ENST00000498607 PICK1Q9NRD5 415 aa13.6□□□□□ -0.23
SCG5-209ENST00000498607 FAM217BQ9NTX9 383 aaPredicted RBP13.6□□□□□ -0.23
SCG5-209ENST00000498607 CPLX1O14810 134 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 CDC27P30260 824 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 KIF5BP33176 963 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 GRM4Q14833 912 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 CPLX2Q6PUV4 134 aaKnown RBP13.59□□□□□ -0.23
SCG5-209ENST00000498607 ARMC9Q7Z3E5 817 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
SCG5-209ENST00000498607 SH2D4AQ9H788 454 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
SCG5-209ENST00000498607 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
SCG5-209ENST00000498607 MYH6P13533 1939 aa13.58□□□□□ -0.23
SCG5-209ENST00000498607 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 TRAF5O00463 557 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 CDKL5O76039 1030 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 PRKG1Q13976 671 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.58□□□□□ -0.24
SCG5-209ENST00000498607 NSUN7Q8NE18 718 aaKnown RBP13.58□□□□□ -0.24
SCG5-209ENST00000498607 GMCL1P1Q8NEA9 526 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
SCG5-209ENST00000498607 SMC3Q9UQE7 1217 aa13.58□□□□□ -0.24
SCG5-209ENST00000498607 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 437.7 ms