RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
TRAF4-212ENST00000498540 RLBP1P12271 317 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 COG2Q14746 738 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 KIAA1755Q5JYT7 1200 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 OLFML2BQ68BL8 750 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 TANGO6Q9C0B7 1094 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 SPATC1LQ9H0A9 340 aa17.86■□□□□ 0.45
TRAF4-212ENST00000498540 EYSQ5T1H1 3165 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 MAGEB6P1A0A0J9YX57 407 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 MPHOSPH10O00566 681 aaKnown RBP17.85■□□□□ 0.45
TRAF4-212ENST00000498540 COBLO75128 1261 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 ERCC3P19447 782 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 ZNF697Q5TEC3 545 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 TMED8Q6PL24 325 aaPredicted RBP17.85■□□□□ 0.45
TRAF4-212ENST00000498540 SLC39A5Q6ZMH5 540 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 AACSQ86V21 672 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
TRAF4-212ENST00000498540 ARRDC4Q8NCT1 418 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 EXOC6BQ9Y2D4 811 aa17.85■□□□□ 0.45
TRAF4-212ENST00000498540 COL11A1P12107 1806 aaPredicted RBP17.84■□□□□ 0.45
TRAF4-212ENST00000498540 KBTBD13C9JR72 458 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 STRNO43815 780 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 PDE6AP16499 860 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 SHHQ15465 462 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 TRIM60Q495X7 471 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 C9orf50Q5SZB4 431 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 CEP85Q6P2H3 762 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 CLEC10AQ8IUN9 316 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 SLC44A5Q8NCS7 719 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 SHCBP1Q8NEM2 672 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 PRDM5Q9NQX1 630 aaPredicted RBP17.84■□□□□ 0.45
TRAF4-212ENST00000498540 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 HOXC10Q9NYD6 342 aa17.84■□□□□ 0.45
TRAF4-212ENST00000498540 ZNFX1Q9P2E3 1918 aaKnown RBP17.84■□□□□ 0.45
TRAF4-212ENST00000498540 SEPT4O43236 478 aa17.83■□□□□ 0.44
TRAF4-212ENST00000498540 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
TRAF4-212ENST00000498540 CYP2D6P10635 497 aa17.83■□□□□ 0.44
TRAF4-212ENST00000498540 SNX17Q15036 470 aa17.83■□□□□ 0.44
TRAF4-212ENST00000498540 PRAMEF19Q5SWL8 479 aa17.83■□□□□ 0.44
TRAF4-212ENST00000498540 SDR42E1Q8WUS8 393 aa17.83■□□□□ 0.44
TRAF4-212ENST00000498540 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.44
TRAF4-212ENST00000498540 BAZ2AQ9UIF9 1905 aaKnown RBP17.82■□□□□ 0.44
TRAF4-212ENST00000498540 PLS1Q14651 629 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 FAM47AQ5JRC9 791 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 SLC9C2Q5TAH2 1124 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 BADQ92934 168 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 ATG4CQ96DT6 458 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 IL1RAPL2Q9NP60 686 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
TRAF4-212ENST00000498540 PDLIM7Q9NR12 457 aa17.82■□□□□ 0.44
TRAF4-212ENST00000498540 SMCHD1A6NHR9 2005 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 ZNF532Q9HCE3 1301 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 DSG3P32926 999 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 ADCYAP1R1P41586 468 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 LRRC41Q15345 812 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 TTF1Q15361 905 aaPredicted RBP17.81■□□□□ 0.44
TRAF4-212ENST00000498540 TMEM179Q6ZVK1 233 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 SH3RF1Q7Z6J0 888 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 NCAPG2Q86XI2 1143 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 SIAH1Q8IUQ4 282 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 SPICE1Q8N0Z3 855 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 MB21D1Q8N884 522 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 MAML3Q96JK9 1138 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 CDX2Q99626 313 aaPredicted RBP17.81■□□□□ 0.44
TRAF4-212ENST00000498540 PLXNA1Q9UIW2 1896 aa17.81■□□□□ 0.44
TRAF4-212ENST00000498540 TCRBV5S4A2TA0A5A2 114 aa17.8■□□□□ 0.44
TRAF4-212ENST00000498540 TRIM43BA6NCK2 446 aa17.8■□□□□ 0.44
TRAF4-212ENST00000498540 FLOT1O75955 427 aa17.8■□□□□ 0.44
TRAF4-212ENST00000498540 ABRAQ8N0Z2 381 aa17.8■□□□□ 0.44
TRAF4-212ENST00000498540 TRIM43Q96BQ3 446 aaPredicted RBP17.8■□□□□ 0.44
TRAF4-212ENST00000498540 MROH8Q9H579 483 aa17.8■□□□□ 0.44
TRAF4-212ENST00000498540 VCANP13611 3396 aa17.79■□□□□ 0.44
TRAF4-212ENST00000498540 SMIM22K7EJ46 135 aa17.79■□□□□ 0.44
TRAF4-212ENST00000498540 AKR1B1P15121 316 aa17.79■□□□□ 0.44
TRAF4-212ENST00000498540 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
TRAF4-212ENST00000498540 DNAJC2Q99543 621 aaKnown RBP17.79■□□□□ 0.44
TRAF4-212ENST00000498540 TTYH1Q9H313 450 aaPredicted RBP17.79■□□□□ 0.44
TRAF4-212ENST00000498540 SEMA6BQ9H3T3 888 aa17.79■□□□□ 0.44
TRAF4-212ENST00000498540 SLC5A4Q9NY91 659 aa17.79■□□□□ 0.44
TRAF4-212ENST00000498540 CDH23Q9H251 3354 aa17.79■□□□□ 0.44
TRAF4-212ENST00000498540 PRUNE2Q8WUY3 3088 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 GOLIM4O00461 696 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 ICA1Q05084 483 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 TMEM132BQ14DG7 1078 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 C1orf53Q5VUE5 145 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 MAFAQ8NHW3 353 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-212ENST00000498540 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 VCPKMTQ9H867 229 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 ARMT1Q9H993 441 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 ARHGEF10LQ9HCE6 1279 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 SWAP70Q9UH65 585 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 TMX2Q9Y320 296 aa17.78■□□□□ 0.44
TRAF4-212ENST00000498540 PRKAB2O43741 272 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms