RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 RNF4P78317 190 aa9.13□□□□□ -0.95
MDM2-220ENST00000496959 TSPYL5Q86VY4 417 aaPredicted RBP9.13□□□□□ -0.95
MDM2-220ENST00000496959 TMEM40Q8WWA1 233 aa9.13□□□□□ -0.95
MDM2-220ENST00000496959 ASCC2Q9H1I8 757 aaPredicted RBP9.13□□□□□ -0.95
MDM2-220ENST00000496959 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
MDM2-220ENST00000496959 GOLGA2P5Q9HBQ8 144 aa9.13□□□□□ -0.95
MDM2-220ENST00000496959 SLAMF8Q9P0V8 285 aa9.13□□□□□ -0.95
MDM2-220ENST00000496959 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
MDM2-220ENST00000496959 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 KCNMB1Q16558 191 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 ZNF394Q53GI3 561 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 OGFOD2Q6N063 350 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 NLRC3Q7RTR2 1065 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 ZSWIM9Q86XI8 627 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
MDM2-220ENST00000496959 UBOX5O94941 541 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 RECKO95980 971 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 LTKP29376 864 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 CCNFP41002 786 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 CLEC16AQ2KHT3 1053 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 GAB4Q2WGN9 574 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 VWCEQ96DN2 955 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 PCDHGB7Q9Y5F8 929 aa9.11□□□□□ -0.95
MDM2-220ENST00000496959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
MDM2-220ENST00000496959 KRTAP9-6A0A140TA67 174 aa9.1□□□□□ -0.95
MDM2-220ENST00000496959 EGR3Q06889 387 aa9.1□□□□□ -0.95
MDM2-220ENST00000496959 SYTL4Q96C24 671 aaPredicted RBP9.1□□□□□ -0.95
MDM2-220ENST00000496959 KIRREL1Q96J84 757 aa9.1□□□□□ -0.95
MDM2-220ENST00000496959 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
MDM2-220ENST00000496959 MEIS3P2A8K0S8 358 aa9.09□□□□□ -0.95
MDM2-220ENST00000496959 NME1P15531 152 aaKnown RBP9.09□□□□□ -0.95
MDM2-220ENST00000496959 MRRFQ96E11 262 aaKnown RBP9.09□□□□□ -0.95
MDM2-220ENST00000496959 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
MDM2-220ENST00000496959 FAM53CQ9NYF3 392 aa9.09□□□□□ -0.95
MDM2-220ENST00000496959 DDX41Q9UJV9 622 aaKnown RBP9.09□□□□□ -0.95
MDM2-220ENST00000496959 DNAJC25-GNG10A0A024R161 153 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 CLEC3AO75596 197 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 IMPDH2P12268 514 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 RAC2P15153 192 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
MDM2-220ENST00000496959 RALGPS1Q5JS13 557 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 NBPF12Q5TAG4 269 aaPredicted RBP9.08□□□□□ -0.96
MDM2-220ENST00000496959 POU5F2Q8N7G0 328 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
MDM2-220ENST00000496959 ADAMTS10Q9H324 1103 aa9.08□□□□□ -0.96
MDM2-220ENST00000496959 GLI1P08151 1106 aa9.07□□□□□ -0.96
MDM2-220ENST00000496959 TMEM67Q5HYA8 995 aa9.07□□□□□ -0.96
MDM2-220ENST00000496959 FYB2Q5VWT5 728 aa9.07□□□□□ -0.96
MDM2-220ENST00000496959 ZNF654Q8IZM8 581 aa9.07□□□□□ -0.96
MDM2-220ENST00000496959 KRTAP4-12Q9BQ66 201 aa9.07□□□□□ -0.96
MDM2-220ENST00000496959 ANTXR1Q9H6X2 564 aa9.07□□□□□ -0.96
MDM2-220ENST00000496959 SHISA3A0PJX4 238 aa9.06□□□□□ -0.96
MDM2-220ENST00000496959 TNFRSF10CO14798 259 aa9.06□□□□□ -0.96
MDM2-220ENST00000496959 YBX3P16989 372 aaKnown RBP eCLIP9.06□□□□□ -0.968e-7■■□□□ 12.2
MDM2-220ENST00000496959 HK2P52789 917 aa9.06□□□□□ -0.96
MDM2-220ENST00000496959 RACK1P63244 317 aaKnown RBP9.06□□□□□ -0.96
MDM2-220ENST00000496959 NMIQ13287 307 aaPredicted RBP9.06□□□□□ -0.96
MDM2-220ENST00000496959 DHX38Q92620 1227 aaKnown RBP9.06□□□□□ -0.96
MDM2-220ENST00000496959 FERD3LQ96RJ6 166 aa9.06□□□□□ -0.96
MDM2-220ENST00000496959 PCDHA11Q9Y5I1 949 aa9.06□□□□□ -0.96
MDM2-220ENST00000496959 NBPF9Q3BBW0 867 aa9.05□□□□□ -0.96
MDM2-220ENST00000496959 ZNRF3Q9ULT6 936 aa9.05□□□□□ -0.96
MDM2-220ENST00000496959 LRRC10BA6NIK2 292 aa9.04□□□□□ -0.96
MDM2-220ENST00000496959 FARP2O94887 1054 aaPredicted RBP9.04□□□□□ -0.96
MDM2-220ENST00000496959 ABHD4Q8TB40 342 aa9.04□□□□□ -0.96
MDM2-220ENST00000496959 SYTL5Q8TDW5 730 aaPredicted RBP9.04□□□□□ -0.96
MDM2-220ENST00000496959 MYLIPQ8WY64 445 aa9.04□□□□□ -0.96
MDM2-220ENST00000496959 ZNF503-AS2A6NEH8 195 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 FBXW10Q5XX13 1052 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
MDM2-220ENST00000496959 MPZL3Q6UWV2 235 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 DAGLBQ8NCG7 672 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 ZNF512BQ96KM6 892 aaPredicted RBP9.03□□□□□ -0.96
MDM2-220ENST00000496959 DHRS1Q96LJ7 313 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 SPATA32Q96LK8 384 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 HDAC8Q9BY41 377 aa9.03□□□□□ -0.96
MDM2-220ENST00000496959 MKRN2Q9H000 416 aaKnown RBP9.03□□□□□ -0.96
MDM2-220ENST00000496959 HPXP02790 462 aa9.02□□□□□ -0.97
MDM2-220ENST00000496959 ZGLP1P0C6A0 271 aa9.02□□□□□ -0.97
MDM2-220ENST00000496959 COL9A2Q14055 689 aaPredicted RBP9.02□□□□□ -0.97
MDM2-220ENST00000496959 METTL16Q86W50 562 aaKnown RBP9.02□□□□□ -0.97
MDM2-220ENST00000496959 TMEM192Q8IY95 271 aa9.02□□□□□ -0.97
MDM2-220ENST00000496959 OXR1Q8N573 874 aa9.02□□□□□ -0.97
MDM2-220ENST00000496959 ZNF655Q8N720 491 aaPredicted RBP9.02□□□□□ -0.97
MDM2-220ENST00000496959 PDZD8Q8NEN9 1154 aa9.02□□□□□ -0.97
MDM2-220ENST00000496959 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
MDM2-220ENST00000496959 SSU72P8A0A1W2PR75 194 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 ERVFC1P60507 584 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 DUSP4Q13115 394 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 PAK2Q13177 524 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 MLANAQ16655 118 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 RNF111Q6ZNA4 994 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 TMC3Q7Z5M5 1100 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 LIN37Q96GY3 246 aaPredicted RBP9.01□□□□□ -0.97
MDM2-220ENST00000496959 TM9SF2Q99805 663 aa9.01□□□□□ -0.97
MDM2-220ENST00000496959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.01□□□□□ -0.97
MDM2-220ENST00000496959 TEKQ02763 1124 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms