RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GDF15Q99988 308 aa28.03■■■□□ 2.08
COL27A1-208ENST00000494780 PFASO15067 1338 aa28.02■■■□□ 2.08
COL27A1-208ENST00000494780 COL6A1P12109 1028 aa28.02■■■□□ 2.08
COL27A1-208ENST00000494780 BMP8BP34820 402 aa28.02■■■□□ 2.08
COL27A1-208ENST00000494780 UBE3CQ15386 1083 aa28.02■■■□□ 2.08
COL27A1-208ENST00000494780 FLRT1Q9NZU1 646 aa28.02■■■□□ 2.08
COL27A1-208ENST00000494780 ZMYND8Q9ULU4 1186 aaPredicted RBP28.02■■■□□ 2.08
COL27A1-208ENST00000494780 SLFNL1Q499Z3 407 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 AMOTL1Q8IY63 956 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 LPAR1Q92633 364 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 CCDC17Q96LX7 622 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 LRRCC1Q9C099 1032 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 TANGO6Q9C0B7 1094 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 ARHGEF10LQ9HCE6 1279 aa28.01■■■□□ 2.07
COL27A1-208ENST00000494780 ATP2B2Q01814 1243 aa28■■■□□ 2.07
COL27A1-208ENST00000494780 SH2D4AQ9H788 454 aa28■■■□□ 2.07
COL27A1-208ENST00000494780 TMX2Q9Y320 296 aa28■■■□□ 2.07
COL27A1-208ENST00000494780 AKR1B1P15121 316 aa27.99■■■□□ 2.07
COL27A1-208ENST00000494780 C12orf60Q5U649 245 aa27.99■■■□□ 2.07
COL27A1-208ENST00000494780 ZSCAN25Q6NSZ9 544 aa27.99■■■□□ 2.07
COL27A1-208ENST00000494780 MB21D1Q8N884 522 aa27.99■■■□□ 2.07
COL27A1-208ENST00000494780 SHCBP1Q8NEM2 672 aa27.99■■■□□ 2.07
COL27A1-208ENST00000494780 DDRGK1Q96HY6 314 aa27.99■■■□□ 2.07
COL27A1-208ENST00000494780 MOV10L1Q9BXT6 1211 aaKnown RBP27.99■■■□□ 2.07
COL27A1-208ENST00000494780 STRNO43815 780 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 MSCO60682 206 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 ICA1Q05084 483 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 KIAA1755Q5JYT7 1200 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 SIAH1Q8IUQ4 282 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 NPLOC4Q8TAT6 608 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 SPATC1LQ9H0A9 340 aa27.98■■■□□ 2.07
COL27A1-208ENST00000494780 MYH8P13535 1937 aa27.97■■■□□ 2.07
COL27A1-208ENST00000494780 USP17L12C9JPN9 530 aa27.97■■■□□ 2.07
COL27A1-208ENST00000494780 USP17L21D6R901 530 aa27.97■■■□□ 2.07
COL27A1-208ENST00000494780 DSG3P32926 999 aa27.97■■■□□ 2.07
COL27A1-208ENST00000494780 CDK8P49336 464 aa27.97■■■□□ 2.07
COL27A1-208ENST00000494780 DDX20Q9UHI6 824 aaKnown RBP27.97■■■□□ 2.07
COL27A1-208ENST00000494780 A0A0G2JMZ2 1700 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 IGHA2P01877 340 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 SYN1P17600 705 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 C20orf194Q5TEA3 1177 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 C16orf86Q6ZW13 317 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 DPP9Q86TI2 863 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 VCPKMTQ9H867 229 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 SLC4A4Q9Y6R1 1079 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 RLFQ13129 1914 aa27.96■■■□□ 2.07
COL27A1-208ENST00000494780 BAZ2AQ9UIF9 1905 aaKnown RBP27.96■■■□□ 2.07
COL27A1-208ENST00000494780 ZNF236Q9UL36 1845 aa27.95■■■□□ 2.07
COL27A1-208ENST00000494780 MYH7P12883 1935 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 CYP2D7A0A087X1C5 515 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 SOX1O00570 391 aaPredicted RBP27.95■■■□□ 2.06
COL27A1-208ENST00000494780 CHGBP05060 677 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 ERCC3P19447 782 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 ADORA2AP29274 412 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 CYP2C19P33261 490 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 OLFML2BQ68BL8 750 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 CLEC10AQ8IUN9 316 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 SZT2Q5T011 3432 aa27.95■■■□□ 2.06
COL27A1-208ENST00000494780 FLOT1O75955 427 aa27.94■■■□□ 2.06
COL27A1-208ENST00000494780 CNGA1P29973 690 aa27.94■■■□□ 2.06
COL27A1-208ENST00000494780 MAGEA10P43363 369 aaPredicted RBP27.94■■■□□ 2.06
COL27A1-208ENST00000494780 SPICE1Q8N0Z3 855 aa27.94■■■□□ 2.06
COL27A1-208ENST00000494780 PUS7LQ9H0K6 701 aaKnown RBP27.94■■■□□ 2.06
COL27A1-208ENST00000494780 MROH8Q9H579 483 aa27.94■■■□□ 2.06
COL27A1-208ENST00000494780 FRMPD3Q5JV73 1810 aa27.94■■■□□ 2.06
COL27A1-208ENST00000494780 SMIM22K7EJ46 135 aa27.93■■■□□ 2.06
COL27A1-208ENST00000494780 WDR46O15213 610 aaKnown RBP27.93■■■□□ 2.06
COL27A1-208ENST00000494780 SMARCA5O60264 1052 aaPredicted RBP27.93■■■□□ 2.06
COL27A1-208ENST00000494780 LRRC26Q2I0M4 334 aa27.93■■■□□ 2.06
COL27A1-208ENST00000494780 ECHDC1Q9NTX5 307 aa27.93■■■□□ 2.06
COL27A1-208ENST00000494780 CYBAP13498 195 aa27.92■■■□□ 2.06
COL27A1-208ENST00000494780 CTR9Q6PD62 1173 aa27.92■■■□□ 2.06
COL27A1-208ENST00000494780 ATG4CQ96DT6 458 aa27.92■■■□□ 2.06
COL27A1-208ENST00000494780 LRCH3Q96II8 777 aa27.92■■■□□ 2.06
COL27A1-208ENST00000494780 KANSL2Q9H9L4 492 aa27.92■■■□□ 2.06
COL27A1-208ENST00000494780 SLC5A4Q9NY91 659 aa27.92■■■□□ 2.06
COL27A1-208ENST00000494780 PLS1Q14651 629 aa27.91■■■□□ 2.06
COL27A1-208ENST00000494780 ABRAQ8N0Z2 381 aa27.91■■■□□ 2.06
COL27A1-208ENST00000494780 TRPV1Q8NER1 839 aa27.91■■■□□ 2.06
COL27A1-208ENST00000494780 ARPP21Q9UBL0 812 aaPredicted RBP27.91■■■□□ 2.06
COL27A1-208ENST00000494780 EEF2P13639 858 aaKnown RBP27.9■■■□□ 2.06
COL27A1-208ENST00000494780 NCAPG2Q86XI2 1143 aa27.9■■■□□ 2.06
COL27A1-208ENST00000494780 SENP6Q9GZR1 1112 aaPredicted RBP27.9■■■□□ 2.06
COL27A1-208ENST00000494780 COBLO75128 1261 aa27.89■■■□□ 2.06
COL27A1-208ENST00000494780 DNM1LO00429 736 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 SLC25A27O95847 323 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 LRIT3Q3SXY7 679 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 GPR153Q6NV75 609 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 TDHQ8IZJ6 230 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 KBTBD3Q8NAB2 608 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 STRBPQ96SI9 672 aaKnown RBP27.88■■■□□ 2.05
COL27A1-208ENST00000494780 UBE2OQ9C0C9 1292 aaKnown RBP27.88■■■□□ 2.05
COL27A1-208ENST00000494780 DCTPP1Q9H773 170 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 ADAMTS5Q9UNA0 930 aa27.88■■■□□ 2.05
COL27A1-208ENST00000494780 TMEM132BQ14DG7 1078 aa27.87■■■□□ 2.05
COL27A1-208ENST00000494780 SBK1Q52WX2 424 aa27.87■■■□□ 2.05
COL27A1-208ENST00000494780 GPATCH3Q96I76 525 aa27.87■■■□□ 2.05
COL27A1-208ENST00000494780 GOPCQ9HD26 462 aa27.87■■■□□ 2.05
COL27A1-208ENST00000494780 PARP14Q460N5 1801 aa27.87■■■□□ 2.05
COL27A1-208ENST00000494780 FCER1AP12319 257 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms