RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 DDX60LQ5H9U9 1706 aaKnown RBP23.72■■□□□ 1.39
SREBF1-216ENST00000490796 A0A1W2PRG0 241 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 USP17L12C9JPN9 530 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 USP17L21D6R901 530 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 PTPREP23469 700 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 ATP2B2Q01814 1243 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 ICA1Q05084 483 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 ECHDC1Q9NTX5 307 aa23.71■■□□□ 1.39
SREBF1-216ENST00000490796 AKR1B1P15121 316 aa23.7■■□□□ 1.38
SREBF1-216ENST00000490796 CDK8P49336 464 aa23.7■■□□□ 1.38
SREBF1-216ENST00000490796 C12orf60Q5U649 245 aa23.7■■□□□ 1.38
SREBF1-216ENST00000490796 C7orf61Q8IZ16 206 aa23.7■■□□□ 1.38
SREBF1-216ENST00000490796 LPAR1Q92633 364 aa23.7■■□□□ 1.38
SREBF1-216ENST00000490796 CCND3P30281 292 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-216ENST00000490796 SAMD1Q6SPF0 538 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-216ENST00000490796 CYP2D7A0A087X1C5 515 aa23.68■■□□□ 1.38
SREBF1-216ENST00000490796 FLOT1O75955 427 aa23.68■■□□□ 1.38
SREBF1-216ENST00000490796 PLS1Q14651 629 aa23.68■■□□□ 1.38
SREBF1-216ENST00000490796 DPP9Q86TI2 863 aa23.68■■□□□ 1.38
SREBF1-216ENST00000490796 MB21D1Q8N884 522 aa23.68■■□□□ 1.38
SREBF1-216ENST00000490796 TMX2Q9Y320 296 aa23.68■■□□□ 1.38
SREBF1-216ENST00000490796 CHGBP05060 677 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 CNGA1P29973 690 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 GRB14Q14449 540 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 C16orf86Q6ZW13 317 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 SPICE1Q8N0Z3 855 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 SPATC1LQ9H0A9 340 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 PUS7LQ9H0K6 701 aaKnown RBP23.67■■□□□ 1.38
SREBF1-216ENST00000490796 VCPKMTQ9H867 229 aa23.67■■□□□ 1.38
SREBF1-216ENST00000490796 RAD21O60216 631 aa23.66■■□□□ 1.38
SREBF1-216ENST00000490796 CLEC10AQ8IUN9 316 aa23.66■■□□□ 1.38
SREBF1-216ENST00000490796 MOV10L1Q9BXT6 1211 aaKnown RBP23.66■■□□□ 1.38
SREBF1-216ENST00000490796 DCTPP1Q9H773 170 aa23.66■■□□□ 1.38
SREBF1-216ENST00000490796 ARPP21Q9UBL0 812 aaPredicted RBP23.66■■□□□ 1.38
SREBF1-216ENST00000490796 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
SREBF1-216ENST00000490796 ZMYND8Q9ULU4 1186 aaPredicted RBP23.66■■□□□ 1.38
SREBF1-216ENST00000490796 MYH8P13535 1937 aa23.66■■□□□ 1.38
SREBF1-216ENST00000490796 BAZ2AQ9UIF9 1905 aaKnown RBP23.66■■□□□ 1.38
SREBF1-216ENST00000490796 STRNO43815 780 aa23.65■■□□□ 1.38
SREBF1-216ENST00000490796 HOXC6P09630 235 aa23.65■■□□□ 1.38
SREBF1-216ENST00000490796 DSG3P32926 999 aa23.65■■□□□ 1.38
SREBF1-216ENST00000490796 CTR9Q6PD62 1173 aa23.65■■□□□ 1.38
SREBF1-216ENST00000490796 KANSL2Q9H9L4 492 aa23.65■■□□□ 1.38
SREBF1-216ENST00000490796 SLC5A4Q9NY91 659 aa23.65■■□□□ 1.38
SREBF1-216ENST00000490796 RANBP2P49792 3224 aaKnown RBP23.65■■□□□ 1.38
SREBF1-216ENST00000490796 A0A1W2PPC1 479 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 WDR46O15213 610 aaKnown RBP23.64■■□□□ 1.37
SREBF1-216ENST00000490796 MSCO60682 206 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 ERCC3P19447 782 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 MNX1P50219 401 aaPredicted RBP23.64■■□□□ 1.37
SREBF1-216ENST00000490796 LRRFIP1Q32MZ4 808 aaKnown RBP23.64■■□□□ 1.37
SREBF1-216ENST00000490796 NCAPG2Q86XI2 1143 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 KBTBD3Q8NAB2 608 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 SHCBP1Q8NEM2 672 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 PRO3102Q9H379 93 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 GOPCQ9HD26 462 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 FLRT1Q9NZU1 646 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 MYH7P12883 1935 aa23.64■■□□□ 1.37
SREBF1-216ENST00000490796 EEF2P13639 858 aaKnown RBP23.63■■□□□ 1.37
SREBF1-216ENST00000490796 ADORA2AP29274 412 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 KIAA1755Q5JYT7 1200 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 LHX8Q68G74 356 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 NPLOC4Q8TAT6 608 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 ATG4CQ96DT6 458 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 MROH8Q9H579 483 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 MKNK2Q9HBH9 465 aa23.63■■□□□ 1.37
SREBF1-216ENST00000490796 SMIM22K7EJ46 135 aa23.62■■□□□ 1.37
SREBF1-216ENST00000490796 CYP2C19P33261 490 aa23.62■■□□□ 1.37
SREBF1-216ENST00000490796 SIAH1Q8IUQ4 282 aa23.62■■□□□ 1.37
SREBF1-216ENST00000490796 APPBP2Q92624 585 aa23.62■■□□□ 1.37
SREBF1-216ENST00000490796 STRBPQ96SI9 672 aaKnown RBP23.62■■□□□ 1.37
SREBF1-216ENST00000490796 DDX20Q9UHI6 824 aaKnown RBP23.62■■□□□ 1.37
SREBF1-216ENST00000490796 MINDY4BA8MYZ0 360 aa23.61■■□□□ 1.37
SREBF1-216ENST00000490796 RNF113AO15541 343 aaKnown RBP23.61■■□□□ 1.37
SREBF1-216ENST00000490796 ZFYP08048 801 aaPredicted RBP23.61■■□□□ 1.37
SREBF1-216ENST00000490796 TSHZ3Q63HK5 1081 aa23.61■■□□□ 1.37
SREBF1-216ENST00000490796 STK11IPQ8N1F8 1099 aa23.61■■□□□ 1.37
SREBF1-216ENST00000490796 PFASO15067 1338 aa23.6■■□□□ 1.37
SREBF1-216ENST00000490796 APPP05067 770 aa23.6■■□□□ 1.37
SREBF1-216ENST00000490796 SYN1P17600 705 aa23.6■■□□□ 1.37
SREBF1-216ENST00000490796 GIMAP6Q6P9H5 292 aa23.6■■□□□ 1.37
SREBF1-216ENST00000490796 ZBTB47Q9UFB7 747 aaPredicted RBP23.6■■□□□ 1.37
SREBF1-216ENST00000490796 ALPK3Q96L96 1907 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 ERC2O15083 957 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 SLC25A27O95847 323 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 FCER1AP12319 257 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 GNAT2P19087 354 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 TDO2P48775 406 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 SBK1Q52WX2 424 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 OLFML2BQ68BL8 750 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 ZNF287Q9HBT7 754 aa23.59■■□□□ 1.37
SREBF1-216ENST00000490796 COL6A1P12109 1028 aa23.58■■□□□ 1.37
SREBF1-216ENST00000490796 ABRAQ8N0Z2 381 aa23.58■■□□□ 1.37
SREBF1-216ENST00000490796 OSBP2Q969R2 916 aa23.58■■□□□ 1.37
SREBF1-216ENST00000490796 SENP6Q9GZR1 1112 aaPredicted RBP23.58■■□□□ 1.37
SREBF1-216ENST00000490796 GSG1L2A8MUP6 293 aa23.57■■□□□ 1.36
SREBF1-216ENST00000490796 GPAA1O43292 621 aa23.57■■□□□ 1.36
SREBF1-216ENST00000490796 GDF15Q99988 308 aa23.57■■□□□ 1.36
SREBF1-216ENST00000490796 COBLO75128 1261 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 BMP8BP34820 402 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms