RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ARPP21Q9UBL0 812 aaPredicted RBP14.24□□□□□ -0.13
SRSF4-204ENST00000489898 STAP2Q9UGK3 403 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 RABGAP1Q9Y3P9 1069 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 SLC4A4Q9Y6R1 1079 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 RNF113AO15541 343 aaKnown RBP14.23□□□□□ -0.13
SRSF4-204ENST00000489898 SGPL1O95470 568 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 XRCC5P13010 732 aaKnown RBP14.23□□□□□ -0.13
SRSF4-204ENST00000489898 MX1P20591 662 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 GRB14Q14449 540 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 ZMYM1Q5SVZ6 1142 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 GPRC5AQ8NFJ5 357 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 COA7Q96BR5 231 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 FEZ1Q99689 392 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 PAGR1Q9BTK6 254 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 VCPKMTQ9H867 229 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 ADAMTS5Q9UNA0 930 aa14.23□□□□□ -0.13
SRSF4-204ENST00000489898 HOXC6P09630 235 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 USP14P54578 494 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 ICA1Q05084 483 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 SMC5Q8IY18 1101 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
SRSF4-204ENST00000489898 SOCS4Q8WXH5 440 aa14.22□□□□□ -0.13
SRSF4-204ENST00000489898 MYH6P13533 1939 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 PFASO15067 1338 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 EEF2P13639 858 aaKnown RBP14.21□□□□□ -0.13
SRSF4-204ENST00000489898 MAPK4P31152 587 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 UBXN2AP68543 259 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 LHX8Q68G74 356 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 TRPV1Q8NER1 839 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 NPLOC4Q8TAT6 608 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 ATG4CQ96DT6 458 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 APBA2Q99767 749 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 PCDH10Q9P2E7 1040 aa14.21□□□□□ -0.13
SRSF4-204ENST00000489898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRSF4-204ENST00000489898 GLRX3O76003 335 aaKnown RBP14.2□□□□□ -0.14
SRSF4-204ENST00000489898 FARP2O94887 1054 aaPredicted RBP14.2□□□□□ -0.14
SRSF4-204ENST00000489898 CYP2B6P20813 491 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 CACNB2Q08289 660 aaPredicted RBP14.2□□□□□ -0.14
SRSF4-204ENST00000489898 VPS53Q5VIR6 699 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 CCDC129Q6ZRS4 1044 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 MOV10L1Q9BXT6 1211 aaKnown RBP14.2□□□□□ -0.14
SRSF4-204ENST00000489898 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 ZNF214Q9UL59 606 aaPredicted RBP14.2□□□□□ -0.14
SRSF4-204ENST00000489898 OGDHLQ9ULD0 1010 aa14.2□□□□□ -0.14
SRSF4-204ENST00000489898 UNC80Q8N2C7 3258 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 A0A0D9SFI3 127 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 H0YGN5 161 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 MPHOSPH10O00566 681 aaKnown RBP14.19□□□□□ -0.14
SRSF4-204ENST00000489898 WDR46O15213 610 aaKnown RBP14.19□□□□□ -0.14
SRSF4-204ENST00000489898 IGHDP01880 384 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 ZFYP08048 801 aaPredicted RBP14.19□□□□□ -0.14
SRSF4-204ENST00000489898 COL6A1P12109 1028 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
SRSF4-204ENST00000489898 PTPREP23469 700 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 CCND3P30281 292 aaPredicted RBP14.19□□□□□ -0.14
SRSF4-204ENST00000489898 DSG3P32926 999 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 PDE1AP54750 535 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 MAP2K5Q13163 448 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 PLEKHH3Q7Z736 793 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 LPAR1Q92633 364 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 CCDC17Q96LX7 622 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 YTHDC1Q96MU7 727 aaKnown RBP14.19□□□□□ -0.14
SRSF4-204ENST00000489898 NBPF3Q9H094 633 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 PRUNE2Q8WUY3 3088 aa14.19□□□□□ -0.14
SRSF4-204ENST00000489898 RPTORQ8N122 1335 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 CHD9Q3L8U1 2897 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 NOVP48745 357 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 TMEM132BQ14DG7 1078 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 IFNL3Q8IZI9 196 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 NUDT12Q9BQG2 462 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 SPATC1LQ9H0A9 340 aa14.18□□□□□ -0.14
SRSF4-204ENST00000489898 COBLO75128 1261 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 PRDM1O75626 825 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 CYBAP13498 195 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 RGS2P41220 211 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 FXR1P51114 621 aaKnown RBP eCLIP14.17□□□□□ -0.14
SRSF4-204ENST00000489898 HABP4Q5JVS0 413 aaKnown RBP14.17□□□□□ -0.14
SRSF4-204ENST00000489898 ZNF589Q86UQ0 364 aaPredicted RBP14.17□□□□□ -0.14
SRSF4-204ENST00000489898 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 EXOC6Q8TAG9 804 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
SRSF4-204ENST00000489898 NUP88Q99567 741 aaPredicted RBP14.17□□□□□ -0.14
SRSF4-204ENST00000489898 REV3LO60673 3130 aa14.16□□□□□ -0.14
SRSF4-204ENST00000489898 SLC15A5A6NIM6 579 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms