RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ZC3H12CQ9C0D7 883 aaKnown RBP9.82□□□□□ -0.84
VTI1A-207ENST00000489357 CLSTN2Q9H4D0 955 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 RTEL1Q9NZ71 1219 aa9.82□□□□□ -0.84
VTI1A-207ENST00000489357 POLR2AP24928 1970 aaKnown RBP9.82□□□□□ -0.84
VTI1A-207ENST00000489357 ZBTB43O43298 467 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 DDNO94850 711 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 VIL1P09327 827 aaKnown RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 KLRK1P26718 216 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 TDO2P48775 406 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 METAP2P50579 478 aaKnown RBP eCLIP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 BCAMP50895 628 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 HAND2P61296 217 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 CCT2P78371 535 aaKnown RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 SPTY2D1Q68D10 685 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 PODNQ7Z5L7 613 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 VPS37DQ86XT2 251 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 TBC1D10CQ8IV04 446 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 NIM1KQ8IY84 436 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 GPC2Q8N158 579 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 DDX11Q96FC9 970 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 GMLQ99445 158 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 LRRC2Q9BYS8 371 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 TNMDQ9H2S6 317 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 EPB41L4AQ9HCS5 686 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 KCNQ5Q9NR82 932 aa9.81□□□□□ -0.84
VTI1A-207ENST00000489357 ORC3Q9UBD5 711 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 NOL7Q9UMY1 257 aaKnown RBP9.81□□□□□ -0.84
VTI1A-207ENST00000489357 MAGEB6P1A0A0J9YX57 407 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 CCDC69A6NI79 296 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 ECE2O60344 883 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 TOMM70O94826 608 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 FGRP09769 529 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 CALM1P0DP23 149 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 CALM2P0DP24 149 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 CALM3P0DP25 149 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 IL1R1P14778 569 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 IFNAR1P17181 557 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 MSNP26038 577 aaKnown RBP9.8□□□□□ -0.84
VTI1A-207ENST00000489357 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 ADALQ6DHV7 355 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 CCDC73Q6ZRK6 1079 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 JMYQ8N9B5 988 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 RDH13Q8NBN7 331 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 FAM200AQ8TCP9 573 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 BICD2Q8TD16 824 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 ESR2Q92731 530 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 FAM84BQ96KN1 310 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-207ENST00000489357 COA1Q9GZY4 146 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 LY9Q9HBG7 655 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 USP25Q9UHP3 1055 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 SLC12A7Q9Y666 1083 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 MORC2Q9Y6X9 1032 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-207ENST00000489357 ADAMTSL1Q8N6G6 1762 aa9.8□□□□□ -0.84
VTI1A-207ENST00000489357 LAMB1P07942 1786 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 ZNF500O60304 480 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 SLC3A2P08195 630 aaKnown RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 CYP7A1P22680 504 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 SCNN1DP51172 638 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 EIF6P56537 245 aaKnown RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 FAM160A1Q05DH4 1040 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 TRIM29Q14134 588 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 THSD4Q6ZMP0 1018 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 TRIM22Q8IYM9 498 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 TDRD7Q8NHU6 1098 aaKnown RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 DPF2Q92785 391 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 RIOK1Q9BRS2 568 aaKnown RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 ARMT1Q9H993 441 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 DBNDD1Q9H9R9 158 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 NCOA5Q9HCD5 579 aaKnown RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 CD209Q9NNX6 404 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 DACT1Q9NYF0 836 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 TFIP11Q9UBB9 837 aaKnown RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 NAP1L2Q9ULW6 460 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-207ENST00000489357 NEDD4P46934 1319 aa9.79□□□□□ -0.84
VTI1A-207ENST00000489357 B4E1Z4 1266 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 PSMD14O00487 310 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 KINO60870 393 aaKnown RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 KDM4AO75164 1064 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 SLC10A3P09131 477 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 CD46P15529 392 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 HIBADHP31937 336 aaKnown RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 PPP4CP60510 307 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 TYRO3Q06418 890 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 PPARAQ07869 468 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 TNIP1Q15025 636 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 SBK1Q52WX2 424 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 CIAPIN1Q6FI81 312 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 SASS6Q6UVJ0 657 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 CYB5R4Q7L1T6 521 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms