RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 NOSTRINQ8IVI9 506 aa23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 DIS3L2Q8IYB7 885 aaKnown RBP23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 FTOQ9C0B1 505 aaKnown RBP eCLIP23.26■■□□□ 1.312e-8■□□□□ 10.3
ATP1A1-208ENST00000488733 DDX19AQ9NUU7 478 aaKnown RBP23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 UTRNP46939 3433 aa23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 SOCS7O14512 581 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 ME1P48163 572 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 SF3A1Q15459 793 aaKnown RBP23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 PPP4R3BQ5MIZ7 849 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 TMOD2Q9NZR1 351 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 FAM198AQ9UFP1 575 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 ZNF280AP59817 542 aaPredicted RBP23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 DPF2Q92785 391 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 CEP95Q96GE4 821 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 CCDC17Q96LX7 622 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 PI4KBQ9UBF8 816 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 KCNJ14Q9UNX9 436 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 CLIC4Q9Y696 253 aa23.25■■□□□ 1.31
ATP1A1-208ENST00000488733 SHTN1A0MZ66 631 aa23.24■■□□□ 1.31
ATP1A1-208ENST00000488733 ENTPD3O75355 529 aa23.24■■□□□ 1.31
ATP1A1-208ENST00000488733 LIG1P18858 919 aa23.24■■□□□ 1.31
ATP1A1-208ENST00000488733 ADALQ6DHV7 355 aa23.24■■□□□ 1.31
ATP1A1-208ENST00000488733 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
ATP1A1-208ENST00000488733 MAD2L2Q9UI95 211 aa23.24■■□□□ 1.31
ATP1A1-208ENST00000488733 DICER1Q9UPY3 1922 aaKnown RBP23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 BTBD18B2RXH4 712 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 SPTLC2O15270 562 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 TCP10Q12799 353 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 FOXP4Q8IVH2 680 aaPredicted RBP23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 ZBED3Q96IU2 234 aaPredicted RBP23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 PHF20Q9BVI0 1012 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 BRMS1Q9HCU9 246 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 MTMR4Q9NYA4 1195 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 ZNF70Q9UC06 446 aaPredicted RBP23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 SBF1O95248 1867 aa23.23■■□□□ 1.31
ATP1A1-208ENST00000488733 A0A1W2PQ27 194 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 A0A1W2PQ64 194 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 A0A1W2PQD8 194 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 CLRN2A0PK11 232 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 PALM3A6NDB9 673 aaPredicted RBP23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 SCG2P13521 617 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 SHMT1P34896 483 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 SLC39A14Q15043 492 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 PFKFB3Q16875 520 aaPredicted RBP23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 SPDYE2Q495Y8 402 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 MICALL2Q8IY33 904 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 NUP62CLQ9H1M0 184 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 TSPY26PQ9H489 355 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 DACT1Q9NYF0 836 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 RNF181Q9P0P0 153 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 IGKV6D-41A0A0C4DH26 115 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 SMARCA1P28370 1054 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 CCAR1Q8IX12 1150 aaKnown RBP23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 JMYQ8N9B5 988 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 VPS54Q9P1Q0 977 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 PCDHA7Q9UN72 937 aa23.22■■□□□ 1.31
ATP1A1-208ENST00000488733 MYH8P13535 1937 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 COL2A1P02458 1487 aaPredicted RBP23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 MYO1BO43795 1136 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 AKR1B1P15121 316 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 KRT2P35908 639 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 GPR162Q16538 588 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 CCDC73Q6ZRK6 1079 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 FAM177A1Q8N128 213 aaPredicted RBP23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 GPC2Q8N158 579 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 SH3GLB2Q9NR46 395 aa23.21■■□□□ 1.31
ATP1A1-208ENST00000488733 WNT10BO00744 389 aa23.2■■□□□ 1.3
ATP1A1-208ENST00000488733 PPP6R2O75170 966 aa23.2■■□□□ 1.3
ATP1A1-208ENST00000488733 PARP1P09874 1014 aaKnown RBP23.2■■□□□ 1.3
ATP1A1-208ENST00000488733 ZSCAN29Q8IWY8 852 aaPredicted RBP23.2■■□□□ 1.3
ATP1A1-208ENST00000488733 STAG2Q8N3U4 1231 aa23.2■■□□□ 1.3
ATP1A1-208ENST00000488733 CNOT7Q9UIV1 285 aaKnown RBP23.2■■□□□ 1.3
ATP1A1-208ENST00000488733 TTLL1O95922 423 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 TRIM34Q9BYJ4 488 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 ATRNL1Q5VV63 1379 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 hCG_1642624A0A1W2PR95 340 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 DDTLA6NHG4 134 aaPredicted RBP23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 NBPF9Q3BBW0 867 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 FKBP1CQ5VVH2 108 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 SH3BP5LQ7L8J4 393 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 SPZ1Q9BXG8 430 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 CLSTN2Q9H4D0 955 aa23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.19■■□□□ 1.3
ATP1A1-208ENST00000488733 KLRF2D3W0D1 207 aa23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 NR1I2O75469 434 aa23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 CALML3P27482 149 aa23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 MAP3K11Q16584 847 aa23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 RBM26Q5T8P6 1007 aaKnown RBP23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 METTL16Q86W50 562 aaKnown RBP23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 MRPS27Q92552 414 aaKnown RBP23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 TNMDQ9H2S6 317 aa23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 VEZTQ9HBM0 779 aa23.18■■□□□ 1.3
ATP1A1-208ENST00000488733 EGFRP00533 1210 aa23.17■■□□□ 1.3
ATP1A1-208ENST00000488733 FAM160A1Q05DH4 1040 aa23.17■■□□□ 1.3
ATP1A1-208ENST00000488733 PTPAQ15257 358 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms