RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
PCCB-215ENST00000482086 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
PCCB-215ENST00000482086 TRIM22Q8IYM9 498 aa17■□□□□ 0.31
PCCB-215ENST00000482086 SCYL3Q8IZE3 742 aa17■□□□□ 0.31
PCCB-215ENST00000482086 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
PCCB-215ENST00000482086 KLRG1Q96E93 195 aa17■□□□□ 0.31
PCCB-215ENST00000482086 PICK1Q9NRD5 415 aa17■□□□□ 0.31
PCCB-215ENST00000482086 SSC5DA1L4H1 1573 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 PTPDC1A2A3K4 754 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 PARP1P09874 1014 aaKnown RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 CDC27P30260 824 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 NUCB2P80303 420 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 SSRP1Q08945 709 aaKnown RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 NOL9Q5SY16 702 aaKnown RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 GMCL1P1Q8NEA9 526 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 DCAF4Q8WV16 495 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 AS3MTQ9HBK9 375 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 GOPCQ9HD26 462 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 FAM217BQ9NTX9 383 aaPredicted RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 RBM27Q9P2N5 1060 aaKnown RBP16.99■□□□□ 0.31
PCCB-215ENST00000482086 STK36Q9NRP7 1315 aa16.99■□□□□ 0.31
PCCB-215ENST00000482086 USP2O75604 605 aaPredicted RBP16.98■□□□□ 0.31
PCCB-215ENST00000482086 CTDNEP1O95476 244 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 SNHG28P0DPA3 235 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 DDIT3P35638 169 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 JAG1P78504 1218 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
PCCB-215ENST00000482086 NTRK3Q16288 839 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 LRRC47Q8N1G4 583 aaKnown RBP16.98■□□□□ 0.31
PCCB-215ENST00000482086 WASF1Q92558 559 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
PCCB-215ENST00000482086 PALM3A6NDB9 673 aaPredicted RBP16.97■□□□□ 0.31
PCCB-215ENST00000482086 UNCXA6NJT0 531 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 INPP5BP32019 993 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 ARMC9Q7Z3E5 817 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 CLEC10AQ8IUN9 316 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 SIAH1Q8IUQ4 282 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 RGS22Q8NE09 1264 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCCB-215ENST00000482086 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
PCCB-215ENST00000482086 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 CSADQ9Y600 493 aa16.97■□□□□ 0.31
PCCB-215ENST00000482086 BAZ2BQ9UIF8 2168 aaKnown RBP16.97■□□□□ 0.31
PCCB-215ENST00000482086 JAK2O60674 1132 aa16.96■□□□□ 0.31
PCCB-215ENST00000482086 FMNL1O95466 1100 aaPredicted RBP16.96■□□□□ 0.31
PCCB-215ENST00000482086 PDHBP11177 359 aa16.96■□□□□ 0.31
PCCB-215ENST00000482086 MAP3K11Q16584 847 aa16.96■□□□□ 0.31
PCCB-215ENST00000482086 SHROOM1Q2M3G4 852 aaPredicted RBP16.96■□□□□ 0.31
PCCB-215ENST00000482086 SLFN13Q68D06 897 aa16.96■□□□□ 0.31
PCCB-215ENST00000482086 GMCL1Q96IK5 515 aa16.96■□□□□ 0.31
PCCB-215ENST00000482086 WDR18Q9BV38 432 aa16.96■□□□□ 0.31
PCCB-215ENST00000482086 ORC3Q9UBD5 711 aaPredicted RBP16.96■□□□□ 0.31
PCCB-215ENST00000482086 KLRF2D3W0D1 207 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 F5H6K3 240 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 DEXIO95424 95 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 USP14P54578 494 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 KLRC3Q07444 240 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.3
PCCB-215ENST00000482086 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.3
PCCB-215ENST00000482086 ANKRD13AQ8IZ07 590 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 ZNF526Q8TF50 670 aaPredicted RBP16.96■□□□□ 0.3
PCCB-215ENST00000482086 DDX11Q96FC9 970 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 SLC26A6Q9BXS9 759 aa16.96■□□□□ 0.3
PCCB-215ENST00000482086 PRPF3O43395 683 aaKnown RBP16.95■□□□□ 0.3
PCCB-215ENST00000482086 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 SLC1A4P43007 532 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 FKBP1BP68106 108 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 TTLL12Q14166 644 aaPredicted RBP16.95■□□□□ 0.3
PCCB-215ENST00000482086 ZKSCAN4Q969J2 545 aaPredicted RBP16.95■□□□□ 0.3
PCCB-215ENST00000482086 FEZ1Q99689 392 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 SPZ1Q9BXG8 430 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 MTMR7Q9Y216 660 aa16.95■□□□□ 0.3
PCCB-215ENST00000482086 TRPM7Q96QT4 1865 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 OTOFQ9HC10 1997 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 PHIPQ8WWQ0 1821 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 PLEKHA8P1O95397 391 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 PTPRAP18433 802 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 FUT2Q10981 343 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 PRKG1Q13976 671 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 CCDC96Q2M329 555 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 NBPF11Q86T75 865 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 SRBD1Q8N5C6 995 aaKnown RBP16.94■□□□□ 0.3
PCCB-215ENST00000482086 LPAR1Q92633 364 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 PHKBQ93100 1093 aa16.94■□□□□ 0.3
PCCB-215ENST00000482086 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
PCCB-215ENST00000482086 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms