RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TBC1D2Q9BYX2 928 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 RNF186Q9NXI6 227 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 TSKSQ9UJT2 592 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 MTMR7Q9Y216 660 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 PEX10O60683 326 aa18.7■□□□□ 0.58
COPS3-207ENST00000477299 TRPA1O75762 1119 aa18.7■□□□□ 0.58
COPS3-207ENST00000477299 JMYQ8N9B5 988 aa18.7■□□□□ 0.58
COPS3-207ENST00000477299 JAKMIP1Q96N16 626 aaKnown RBP18.7■□□□□ 0.58
COPS3-207ENST00000477299 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
COPS3-207ENST00000477299 TNKSO95271 1327 aa18.7■□□□□ 0.58
COPS3-207ENST00000477299 F5H6K3 240 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 PDHXO00330 501 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 EPB41L2O43491 1005 aaKnown RBP18.69■□□□□ 0.58
COPS3-207ENST00000477299 PRC1O43663 620 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 TBC1D8O95759 1140 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 CYP2C8P10632 490 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 ZKSCAN1P17029 563 aaPredicted RBP18.69■□□□□ 0.58
COPS3-207ENST00000477299 VCAM1P19320 739 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 EXOSC10Q01780 885 aaKnown RBP18.69■□□□□ 0.58
COPS3-207ENST00000477299 KLRC3Q07444 240 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 SREBF2Q12772 1141 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 FASTKD5Q7L8L6 764 aaKnown RBP18.69■□□□□ 0.58
COPS3-207ENST00000477299 IGDCC4Q8TDY8 1250 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 BACH2Q9BYV9 841 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 WBP1LQ9NX94 342 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 TMOD4Q9NZQ9 345 aa18.69■□□□□ 0.58
COPS3-207ENST00000477299 COL11A1P12107 1806 aaPredicted RBP18.68■□□□□ 0.58
COPS3-207ENST00000477299 IFIT3O14879 490 aaKnown RBP18.68■□□□□ 0.58
COPS3-207ENST00000477299 NDUFB10O96000 172 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 INHBEP58166 350 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 ANKRD23Q86SG2 305 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 IQCA1Q86XH1 822 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
COPS3-207ENST00000477299 AGTPBP1Q9UPW5 1226 aa18.68■□□□□ 0.58
COPS3-207ENST00000477299 TOP1P11387 765 aaKnown RBP18.67■□□□□ 0.58
COPS3-207ENST00000477299 MCCP23508 829 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 MCM5P33992 734 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 USP14P54578 494 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 SLFN13Q68D06 897 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 ANKS1AQ92625 1134 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 P2RX7Q99572 595 aaKnown RBP18.67■□□□□ 0.58
COPS3-207ENST00000477299 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 RPAP3Q9H6T3 665 aaPredicted RBP18.67■□□□□ 0.58
COPS3-207ENST00000477299 FBXO28Q9NVF7 368 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 SMCHD1A6NHR9 2005 aa18.67■□□□□ 0.58
COPS3-207ENST00000477299 ZSWIM8A7E2V4 1837 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 CASTP20810 708 aaKnown RBP18.66■□□□□ 0.58
COPS3-207ENST00000477299 CRHR2Q13324 411 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 TMEM67Q5HYA8 995 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 DGKHQ86XP1 1220 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 TTC14Q96N46 770 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 UPF3BQ9BZI7 483 aaKnown RBP18.66■□□□□ 0.58
COPS3-207ENST00000477299 ASCC2Q9H1I8 757 aaPredicted RBP18.66■□□□□ 0.58
COPS3-207ENST00000477299 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 CASP8AP2Q9UKL3 1982 aa18.66■□□□□ 0.58
COPS3-207ENST00000477299 BAZ2BQ9UIF8 2168 aaKnown RBP18.65■□□□□ 0.58
COPS3-207ENST00000477299 SH2B2O14492 632 aaPredicted RBP18.65■□□□□ 0.58
COPS3-207ENST00000477299 MAP2K1Q02750 393 aaPredicted RBP18.65■□□□□ 0.58
COPS3-207ENST00000477299 KRT32Q14532 448 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
COPS3-207ENST00000477299 TTBK2Q6IQ55 1244 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
COPS3-207ENST00000477299 CATSPERGQ6ZRH7 1159 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 KCTD1Q719H9 257 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 DHX32Q7L7V1 743 aaKnown RBP18.65■□□□□ 0.58
COPS3-207ENST00000477299 RAB11FIP4Q86YS3 637 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 GOPCQ9HD26 462 aa18.65■□□□□ 0.58
COPS3-207ENST00000477299 RPS6KB1P23443 525 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 HOXA7P31268 230 aaPredicted RBP18.64■□□□□ 0.57
COPS3-207ENST00000477299 WTAPQ15007 396 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 IFIT1BQ5T764 474 aaKnown RBP18.64■□□□□ 0.57
COPS3-207ENST00000477299 BLOC1S2Q6QNY1 142 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 REM2Q8IYK8 340 aaPredicted RBP18.64■□□□□ 0.57
COPS3-207ENST00000477299 PNMA1Q8ND90 353 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 GMCL1P1Q8NEA9 526 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 KIF2CQ99661 725 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 LARP6Q9BRS8 491 aaKnown RBP18.64■□□□□ 0.57
COPS3-207ENST00000477299 MYL10Q9BUA6 226 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 C22orf23Q9BZE7 217 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 CPVLQ9H3G5 476 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 ZSWIM6Q9HCJ5 1215 aa18.64■□□□□ 0.57
COPS3-207ENST00000477299 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
COPS3-207ENST00000477299 DOCK3Q8IZD9 2030 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L15C9J2P7 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L13C9JLJ4 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L11C9JVI0 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L18D6R9N7 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L22D6RA61 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L17D6RBQ6 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L19D6RCP7 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L20D6RJB6 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 FOXN1O15353 648 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 USP17L24Q0WX57 530 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 TANGO6Q9C0B7 1094 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms