RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LRRC3Q9BY71 257 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 ADAMTS10Q9H324 1103 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 COPRSQ9NQ92 184 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 KCNQ5Q9NR82 932 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 SUPT16HQ9Y5B9 1047 aaKnown RBP8.42□□□□□ -1.06
CD46-213ENST00000471987 TLR3O15455 904 aaKnown RBP8.41□□□□□ -1.06
CD46-213ENST00000471987 LRRN2O75325 713 aa8.41□□□□□ -1.06
CD46-213ENST00000471987 LTKP29376 864 aa8.41□□□□□ -1.06
CD46-213ENST00000471987 EIF4A3P38919 411 aaKnown RBP8.41□□□□□ -1.06
CD46-213ENST00000471987 MYLIPQ8WY64 445 aa8.41□□□□□ -1.06
CD46-213ENST00000471987 PPP1R16BQ96T49 567 aa8.41□□□□□ -1.06
CD46-213ENST00000471987 DNAJA2O60884 412 aa8.4□□□□□ -1.06
CD46-213ENST00000471987 HPXP02790 462 aa8.4□□□□□ -1.06
CD46-213ENST00000471987 GBP1P32455 592 aa8.4□□□□□ -1.06
CD46-213ENST00000471987 HS2ST1Q7LGA3 356 aa8.4□□□□□ -1.06
CD46-213ENST00000471987 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.06
CD46-213ENST00000471987 KIF2CQ99661 725 aa8.4□□□□□ -1.06
CD46-213ENST00000471987 RGS13O14921 159 aa8.39□□□□□ -1.07
CD46-213ENST00000471987 GREM1O60565 184 aa8.39□□□□□ -1.07
CD46-213ENST00000471987 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
CD46-213ENST00000471987 DHX38Q92620 1227 aaKnown RBP8.39□□□□□ -1.07
CD46-213ENST00000471987 GGT7Q9UJ14 662 aa8.39□□□□□ -1.07
CD46-213ENST00000471987 PCDHA11Q9Y5I1 949 aa8.39□□□□□ -1.07
CD46-213ENST00000471987 RBM47A0AV96 593 aaKnown RBP8.38□□□□□ -1.07
CD46-213ENST00000471987 TSPAN15O95858 294 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 RAG1P15918 1043 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 ERVFC1P60507 584 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 CLEC16AQ2KHT3 1053 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 OXR1Q8N573 874 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 FBXO15Q8NCQ5 510 aaPredicted RBP8.38□□□□□ -1.07
CD46-213ENST00000471987 PDZD8Q8NEN9 1154 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 DIRC2Q96SL1 478 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 ASCC2Q9H1I8 757 aaPredicted RBP8.38□□□□□ -1.07
CD46-213ENST00000471987 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
CD46-213ENST00000471987 BRMS1Q9HCU9 246 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 GMIPQ9P107 970 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 PCDHB14Q9Y5E9 798 aa8.38□□□□□ -1.07
CD46-213ENST00000471987 SLC22A31A6NKX4 558 aa8.37□□□□□ -1.07
CD46-213ENST00000471987 ATE1O95260 518 aa8.37□□□□□ -1.07
CD46-213ENST00000471987 ZGLP1P0C6A0 271 aa8.37□□□□□ -1.07
CD46-213ENST00000471987 RAP1GAPP47736 663 aa8.37□□□□□ -1.07
CD46-213ENST00000471987 ARSHQ5FYA8 562 aa8.37□□□□□ -1.07
CD46-213ENST00000471987 SYDE1Q6ZW31 735 aaPredicted RBP8.37□□□□□ -1.07
CD46-213ENST00000471987 ZNF296Q8WUU4 475 aaPredicted RBP8.37□□□□□ -1.07
CD46-213ENST00000471987 RNF4P78317 190 aa8.36□□□□□ -1.07
CD46-213ENST00000471987 LILRA2Q8N149 483 aa8.36□□□□□ -1.07
CD46-213ENST00000471987 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
CD46-213ENST00000471987 VWCEQ96DN2 955 aa8.36□□□□□ -1.07
CD46-213ENST00000471987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.36□□□□□ -1.07
CD46-213ENST00000471987 SHISA3A0PJX4 238 aa8.35□□□□□ -1.07
CD46-213ENST00000471987 FITM1A5D6W6 292 aa8.35□□□□□ -1.07
CD46-213ENST00000471987 EPB41L4BQ9H329 900 aa8.35□□□□□ -1.07
CD46-213ENST00000471987 EHMT1Q9H9B1 1298 aa8.35□□□□□ -1.07
CD46-213ENST00000471987 DCP1AQ9NPI6 582 aaPredicted RBP8.35□□□□□ -1.07
CD46-213ENST00000471987 UBOX5O94941 541 aa8.34□□□□□ -1.07
CD46-213ENST00000471987 CRKP46108 304 aa8.34□□□□□ -1.07
CD46-213ENST00000471987 DUSP4Q13115 394 aa8.34□□□□□ -1.07
CD46-213ENST00000471987 SPPL2CQ8IUH8 684 aa8.34□□□□□ -1.07
CD46-213ENST00000471987 TOX2Q96NM4 488 aa8.34□□□□□ -1.07
CD46-213ENST00000471987 ADAMTS1Q9UHI8 967 aa8.34□□□□□ -1.07
CD46-213ENST00000471987 NFIBO00712 420 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 TRHRP34981 398 aaPredicted RBP8.33□□□□□ -1.08
CD46-213ENST00000471987 TEKQ02763 1124 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 RAD51AP2Q09MP3 1159 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 APOBRQ0VD83 1088 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 NMIQ13287 307 aaPredicted RBP8.33□□□□□ -1.08
CD46-213ENST00000471987 NR0B2Q15466 257 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 SEZ6Q53EL9 994 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 CDCP2Q5VXM1 449 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 OVOS1Q6IE37 1185 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
CD46-213ENST00000471987 SYTL5Q8TDW5 730 aaPredicted RBP8.33□□□□□ -1.08
CD46-213ENST00000471987 SP110Q9HB58 689 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
CD46-213ENST00000471987 CHRNEQ04844 493 aa8.32□□□□□ -1.08
CD46-213ENST00000471987 KRTAP19-4Q3LI73 84 aa8.32□□□□□ -1.08
CD46-213ENST00000471987 ANKLE2Q86XL3 938 aa8.32□□□□□ -1.08
CD46-213ENST00000471987 RNF32Q9H0A6 362 aa8.32□□□□□ -1.08
CD46-213ENST00000471987 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
CD46-213ENST00000471987 CNNM2Q9H8M5 875 aa8.32□□□□□ -1.08
CD46-213ENST00000471987 CCNFP41002 786 aa8.31□□□□□ -1.08
CD46-213ENST00000471987 ZNF165P49910 485 aa8.31□□□□□ -1.08
CD46-213ENST00000471987 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
CD46-213ENST00000471987 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
CD46-213ENST00000471987 RNF111Q6ZNA4 994 aa8.31□□□□□ -1.08
CD46-213ENST00000471987 GK5Q6ZS86 529 aa8.31□□□□□ -1.08
CD46-213ENST00000471987 ANKS4BQ8N8V4 417 aa8.31□□□□□ -1.08
CD46-213ENST00000471987 DAGLBQ8NCG7 672 aa8.31□□□□□ -1.08
CD46-213ENST00000471987 CWC22Q9HCG8 908 aaKnown RBP8.31□□□□□ -1.08
CD46-213ENST00000471987 TMEM253P0C7T8 217 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 MCM4P33991 863 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 SNX17Q15036 470 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 NLRC3Q7RTR2 1065 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 CILP2Q8IUL8 1156 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 ZNF655Q8N720 491 aaPredicted RBP8.3□□□□□ -1.08
CD46-213ENST00000471987 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 SLC26A8Q96RN1 970 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 NT5C1AQ9BXI3 368 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms