RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 NPY5RQ15761 445 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 TYW1BQ6NUM6 668 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 CTNND2Q9UQB3 1225 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 FAM205AQ6ZU69 1335 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 MORC3Q14149 939 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 TOGARAM2Q6ZUX3 1019 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 IL17RBQ9NRM6 502 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 A0A0U1RQJ8 604 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 RIMBP2O15034 1052 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 RAD21O60216 631 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 RRAGBQ5VZM2 374 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 RCSD1Q6JBY9 416 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 ZNF444Q8N0Y2 327 aaPredicted RBP20.29■□□□□ 0.84
MCF2L-221ENST00000469415 ATRIPQ8WXE1 791 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 USP21Q9UK80 565 aa20.29■□□□□ 0.84
MCF2L-221ENST00000469415 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 CUL4BQ13620 913 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 INF2Q27J81 1249 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 SLURP2P0DP57 97 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 DPYDQ12882 1025 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 TRAPPC3LQ5T215 181 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 ANKRD7Q92527 254 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 BAG1Q99933 345 aaPredicted RBP20.28■□□□□ 0.84
MCF2L-221ENST00000469415 ANKRD2Q9GZV1 360 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 VPS16Q9H269 839 aa20.28■□□□□ 0.84
MCF2L-221ENST00000469415 TM4SF1P30408 202 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 PICALMQ13492 652 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 IL17AQ16552 155 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 CLEC10AQ8IUN9 316 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 GPIHBP1Q8IV16 184 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 MLKLQ8NB16 471 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 LZTFL1Q9NQ48 299 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 RBM28Q9NW13 759 aaKnown RBP20.27■□□□□ 0.84
MCF2L-221ENST00000469415 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.27■□□□□ 0.84
MCF2L-221ENST00000469415 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
MCF2L-221ENST00000469415 FAM237AA0A1B0GTK4 181 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 UFL1O94874 794 aa20.27■□□□□ 0.84
MCF2L-221ENST00000469415 GNG11P61952 73 aa20.27■□□□□ 0.83
MCF2L-221ENST00000469415 PRDM4Q9UKN5 801 aa20.27■□□□□ 0.83
MCF2L-221ENST00000469415 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 SLU7O95391 586 aaKnown RBP20.26■□□□□ 0.83
MCF2L-221ENST00000469415 GDAQ9Y2T3 454 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 SOWAHDA6NJG2 315 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 SLFN14P0C7P3 912 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 ATP8A2Q9NTI2 1148 aa20.26■□□□□ 0.83
MCF2L-221ENST00000469415 FANCGO15287 622 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 SLC10A5Q5PT55 438 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 SPECC1LQ69YQ0 1117 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 USP17L2Q6R6M4 530 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
MCF2L-221ENST00000469415 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
MCF2L-221ENST00000469415 SYNRGQ9UMZ2 1314 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.25■□□□□ 0.83
MCF2L-221ENST00000469415 CCDC194A0A1B0GVG4 234 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 CALM1P0DP23 149 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 CALM2P0DP24 149 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 CALM3P0DP25 149 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 ERCC3P19447 782 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 SARSP49591 514 aaKnown RBP20.25■□□□□ 0.83
MCF2L-221ENST00000469415 ARPP21Q9UBL0 812 aaPredicted RBP20.25■□□□□ 0.83
MCF2L-221ENST00000469415 MYH13Q9UKX3 1938 aa20.25■□□□□ 0.83
MCF2L-221ENST00000469415 TOM1O60784 492 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 KMT5BQ4FZB7 885 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 PPP2R2CQ9Y2T4 447 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 DDAH1O94760 285 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 FBXO38Q6PIJ6 1188 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 TAB2Q9NYJ8 693 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 DACH1Q9UI36 760 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 GPSM2P81274 684 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 ATP2B2Q01814 1243 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 IGSF22Q8N9C0 903 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 TC2NQ8N9U0 490 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 ENOX1Q8TC92 643 aaKnown RBP20.24■□□□□ 0.83
MCF2L-221ENST00000469415 WDR24Q96S15 920 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 CARD6Q9BX69 1037 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 TMEM60Q9H2L4 133 aa20.24■□□□□ 0.83
MCF2L-221ENST00000469415 XDHP47989 1333 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 TRIM49BA6NDI0 452 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 BTDP43251 543 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 ETF1P62495 437 aaKnown RBP20.23■□□□□ 0.83
MCF2L-221ENST00000469415 MEX3CQ5U5Q3 659 aaKnown RBP20.23■□□□□ 0.83
MCF2L-221ENST00000469415 C12orf60Q5U649 245 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 BLIDQ8IZY5 108 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 MTRQ99707 1265 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 KIF5BP33176 963 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 RBL2Q08999 1139 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-221ENST00000469415 SLC35G1Q2M3R5 365 aa20.23■□□□□ 0.83
MCF2L-221ENST00000469415 ZNF579Q8NAF0 562 aaKnown RBP20.23■□□□□ 0.83
MCF2L-221ENST00000469415 CYTH3O43739 400 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 KANK3Q6NY19 840 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 CCDC34Q96HJ3 373 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 MXD3Q9BW11 206 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 LRRC4BQ9NT99 713 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms