RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 DUSP9Q99956 384 aaKnown RBP6.93□□□□□ -1.3
SCFD1-205ENST00000469043 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 RNF32Q9H0A6 362 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 RBAK-RBAKDNI3L0D1 243 aa6.92□□□□□ -1.3
SCFD1-205ENST00000469043 BPNT1O95861 308 aa6.92□□□□□ -1.3
SCFD1-205ENST00000469043 ZGLP1P0C6A0 271 aa6.92□□□□□ -1.3
SCFD1-205ENST00000469043 LINC00310P59036 64 aa6.92□□□□□ -1.3
SCFD1-205ENST00000469043 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-205ENST00000469043 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-205ENST00000469043 PPP1R13LQ8WUF5 828 aa6.92□□□□□ -1.3
SCFD1-205ENST00000469043 NOC4LQ9BVI4 516 aaKnown RBP6.92□□□□□ -1.3
SCFD1-205ENST00000469043 C19orf44Q9H6X5 657 aa6.92□□□□□ -1.3
SCFD1-205ENST00000469043 CWC22Q9HCG8 908 aaKnown RBP6.92□□□□□ -1.3
SCFD1-205ENST00000469043 UPK3BL1B0FP48 263 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 B8ZZF3 427 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 UPK3BL2E5RIL1 263 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 PRRG2O14669 202 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 NR0B2Q15466 257 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 TAF1CQ15572 869 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-205ENST00000469043 TMEM132EQ6IEE7 984 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 RNF141Q8WVD5 230 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 TLR6Q9Y2C9 796 aa6.91□□□□□ -1.3
SCFD1-205ENST00000469043 PEX10O60683 326 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 INHBBP09529 407 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 TNNI2P48788 182 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 DUSP4Q13115 394 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 SNX17Q15036 470 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 TMEM201Q5SNT2 666 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 MEI1Q5TIA1 1274 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 IRF2BPLQ9H1B7 796 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 SP110Q9HB58 689 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 IGSF5Q9NSI5 407 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 PCDHA11Q9Y5I1 949 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 CORINQ9Y5Q5 1042 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 NCANO14594 1321 aa6.9□□□□□ -1.3
SCFD1-205ENST00000469043 ST13P50502 369 aaKnown RBP6.89□□□□□ -1.31
SCFD1-205ENST00000469043 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
SCFD1-205ENST00000469043 CHRNEQ04844 493 aa6.89□□□□□ -1.31
SCFD1-205ENST00000469043 ZNF605Q86T29 641 aa6.89□□□□□ -1.31
SCFD1-205ENST00000469043 YBX2Q9Y2T7 364 aaKnown RBP6.89□□□□□ -1.31
SCFD1-205ENST00000469043 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
SCFD1-205ENST00000469043 SEMA7AO75326 666 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 PDE6BP35913 854 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 CTSWP56202 376 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 DLG4P78352 724 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 CLEC16AQ2KHT3 1053 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 SLFN12Q8IYM2 578 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 ANKS4BQ8N8V4 417 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
SCFD1-205ENST00000469043 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 RNF19AQ9NV58 838 aa6.88□□□□□ -1.31
SCFD1-205ENST00000469043 LRRN2O75325 713 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 CILPO75339 1184 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 PSMD2Q13200 908 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 BAHD1Q8TBE0 780 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-205ENST00000469043 CCDC74BQ96LY2 380 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 ASPNQ9BXN1 380 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 ASCC2Q9H1I8 757 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-205ENST00000469043 ZNF552Q9H707 407 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-205ENST00000469043 PARP2Q9UGN5 583 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 GPR160Q9UJ42 338 aa6.87□□□□□ -1.31
SCFD1-205ENST00000469043 ANKRD33BA6NCL7 494 aa6.86□□□□□ -1.31
SCFD1-205ENST00000469043 LMNB2Q03252 620 aa6.86□□□□□ -1.31
SCFD1-205ENST00000469043 CAMK2GQ13555 558 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-205ENST00000469043 TIGD5Q53EQ6 642 aa6.86□□□□□ -1.31
SCFD1-205ENST00000469043 BNC2Q6ZN30 1099 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-205ENST00000469043 GATAD2BQ8WXI9 593 aa6.86□□□□□ -1.31
SCFD1-205ENST00000469043 KREMEN1Q96MU8 473 aa6.86□□□□□ -1.31
SCFD1-205ENST00000469043 CNOT6Q9ULM6 557 aaKnown RBP6.86□□□□□ -1.31
SCFD1-205ENST00000469043 USP31Q70CQ4 1352 aa6.85□□□□□ -1.31
SCFD1-205ENST00000469043 TEX51A0A1B0GUA7 166 aa6.85□□□□□ -1.31
SCFD1-205ENST00000469043 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-205ENST00000469043 ZNF385BQ569K4 471 aa6.85□□□□□ -1.31
SCFD1-205ENST00000469043 RELL1Q8IUW5 271 aa6.85□□□□□ -1.31
SCFD1-205ENST00000469043 PHACTR4Q8IZ21 702 aa6.85□□□□□ -1.31
SCFD1-205ENST00000469043 KRTAP4-11Q9BYQ6 195 aa6.85□□□□□ -1.31
SCFD1-205ENST00000469043 PRR36Q9H6K5 1346 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 MYOCOSA0A1B0GUC4 107 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 FAM221AA4D161 298 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 CHURC1-FNTBB4DL54 471 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 F13A1P00488 732 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 GBP1P32455 592 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 DAB2P98082 770 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 TEKQ02763 1124 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
SCFD1-205ENST00000469043 ZCCHC4Q9H5U6 513 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
SCFD1-205ENST00000469043 RFXAPO00287 272 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 PF4P02776 101 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 BMP7P18075 431 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 HOXA5P20719 270 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 MLECQ14165 292 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 TCERG1LQ5VWI1 586 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 LINC01599Q8WXQ3 324 aa6.83□□□□□ -1.32
SCFD1-205ENST00000469043 MRRFQ96E11 262 aaKnown RBP6.83□□□□□ -1.32
SCFD1-205ENST00000469043 PARD6AQ9NPB6 346 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms