RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 KIF23Q02241 960 aaPredicted RBP18.81■□□□□ 0.6
GPC1-207ENST00000466624 GRM1Q13255 1194 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 MOGSQ13724 837 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 SEC23AQ15436 765 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 CCL15Q16663 113 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 DNAJC5GQ8N7S2 189 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 ENAHQ8N8S7 591 aaPredicted RBP18.81■□□□□ 0.6
GPC1-207ENST00000466624 LPAR1Q92633 364 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 C22orf23Q9BZE7 217 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 VCPKMTQ9H867 229 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 AOC2O75106 756 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 ATP2B2Q01814 1243 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 BLOC1S2Q6QNY1 142 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 GMCL1P1Q8NEA9 526 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 BRI3BPQ8WY22 251 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 ZSWIM6Q9HCJ5 1215 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
GPC1-207ENST00000466624 EMILIN3Q9NT22 766 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 TMOD4Q9NZQ9 345 aa18.8■□□□□ 0.6
GPC1-207ENST00000466624 IFIT3O14879 490 aaKnown RBP18.79■□□□□ 0.6
GPC1-207ENST00000466624 ANKRD23Q86SG2 305 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 FBXL16Q8N461 479 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 ZIC5Q96T25 663 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 TMEM47Q9BQJ4 181 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 PARP14Q460N5 1801 aa18.79■□□□□ 0.6
GPC1-207ENST00000466624 SH2B2O14492 632 aaPredicted RBP18.78■□□□□ 0.6
GPC1-207ENST00000466624 CASTP20810 708 aaKnown RBP18.78■□□□□ 0.6
GPC1-207ENST00000466624 RPS6KB1P23443 525 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 LIFRP42702 1097 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 COL9A3Q14050 684 aaPredicted RBP18.78■□□□□ 0.6
GPC1-207ENST00000466624 WTAPQ15007 396 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 IFIT1BQ5T764 474 aaKnown RBP18.78■□□□□ 0.6
GPC1-207ENST00000466624 RUFY3Q7L099 469 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 CHST3Q7LGC8 479 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 TMTC2Q8N394 836 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 AGTPBP1Q9UPW5 1226 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 CYP46A1Q9Y6A2 500 aa18.78■□□□□ 0.6
GPC1-207ENST00000466624 F5H6K3 240 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 WDR46O15213 610 aaKnown RBP18.77■□□□□ 0.6
GPC1-207ENST00000466624 KLRC3Q07444 240 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.6
GPC1-207ENST00000466624 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
GPC1-207ENST00000466624 OTUD7BQ6GQQ9 843 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 GPAT2Q6NUI2 795 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 GADL1Q6ZQY3 521 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 IFNL1Q8IU54 200 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 LRRC47Q8N1G4 583 aaKnown RBP18.77■□□□□ 0.6
GPC1-207ENST00000466624 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 KAT14Q9H8E8 782 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 LY9Q9HBG7 655 aa18.77■□□□□ 0.6
GPC1-207ENST00000466624 BTBD19C9JJ37 291 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 NDUFB10O96000 172 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 ALDH1A1P00352 501 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 VCAM1P19320 739 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 HOXA7P31268 230 aaPredicted RBP18.76■□□□□ 0.59
GPC1-207ENST00000466624 PNMA1Q8ND90 353 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 GMCL1Q96IK5 515 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 PTPN18Q99952 460 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 AGXT2Q9BYV1 514 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 RLFQ13129 1914 aa18.76■□□□□ 0.59
GPC1-207ENST00000466624 IGF2BP3O00425 579 aaKnown RBP eCLIP18.75■□□□□ 0.59
GPC1-207ENST00000466624 DGKZQ13574 1117 aa18.75■□□□□ 0.59
GPC1-207ENST00000466624 KIAA1755Q5JYT7 1200 aa18.75■□□□□ 0.59
GPC1-207ENST00000466624 TREML2Q5T2D2 321 aa18.75■□□□□ 0.59
GPC1-207ENST00000466624 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
GPC1-207ENST00000466624 IL27Q8NEV9 243 aa18.75■□□□□ 0.59
GPC1-207ENST00000466624 DCAF4Q8WV16 495 aa18.75■□□□□ 0.59
GPC1-207ENST00000466624 USP17L15C9J2P7 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L13C9JLJ4 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L11C9JVI0 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L18D6R9N7 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L22D6RA61 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L17D6RBQ6 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L19D6RCP7 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L20D6RJB6 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 SNHG28P0DPA3 235 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 CPA1P15085 419 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 USP17L24Q0WX57 530 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 ALDH8A1Q9H2A2 487 aaPredicted RBP18.74■□□□□ 0.59
GPC1-207ENST00000466624 PNMA3Q9UL41 463 aa18.74■□□□□ 0.59
GPC1-207ENST00000466624 PDHXO00330 501 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 PDHBP11177 359 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 MAP2K1Q02750 393 aaPredicted RBP18.73■□□□□ 0.59
GPC1-207ENST00000466624 CATSPERGQ6ZRH7 1159 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 SPICE1Q8N0Z3 855 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 JMYQ8N9B5 988 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 TCEANC2Q96MN5 208 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 KIF2CQ99661 725 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 CFHR5Q9BXR6 569 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 LRRC2Q9BYS8 371 aa18.73■□□□□ 0.59
GPC1-207ENST00000466624 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
GPC1-207ENST00000466624 RPAP3Q9H6T3 665 aaPredicted RBP18.73■□□□□ 0.59
GPC1-207ENST00000466624 A0A0G2JMZ2 1700 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms