RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 URI1O94763 535 aaPredicted RBP19.27■□□□□ 0.68
ACTB-207ENST00000462494 CD44P16070 742 aaKnown RBP19.27■□□□□ 0.68
ACTB-207ENST00000462494 BARGINQ6ZT62 677 aa19.27■□□□□ 0.68
ACTB-207ENST00000462494 FCHSD1Q86WN1 690 aa19.27■□□□□ 0.68
ACTB-207ENST00000462494 TNFRSF25Q93038 417 aa19.27■□□□□ 0.68
ACTB-207ENST00000462494 MYH13Q9UKX3 1938 aa19.27■□□□□ 0.68
ACTB-207ENST00000462494 SCN7AQ01118 1682 aa19.27■□□□□ 0.67
ACTB-207ENST00000462494 SYNRGQ9UMZ2 1314 aa19.27■□□□□ 0.67
ACTB-207ENST00000462494 ORC4O43929 436 aa19.27■□□□□ 0.67
ACTB-207ENST00000462494 VEGFAP15692 232 aaPredicted RBP19.27■□□□□ 0.67
ACTB-207ENST00000462494 NR1I3Q14994 352 aa19.27■□□□□ 0.67
ACTB-207ENST00000462494 SLC10A5Q5PT55 438 aa19.27■□□□□ 0.67
ACTB-207ENST00000462494 ATP8A2Q9NTI2 1148 aa19.27■□□□□ 0.67
ACTB-207ENST00000462494 SCG2P13521 617 aa19.26■□□□□ 0.67
ACTB-207ENST00000462494 MCM7P33993 719 aa19.26■□□□□ 0.67
ACTB-207ENST00000462494 TOGARAM2Q6ZUX3 1019 aa19.26■□□□□ 0.67
ACTB-207ENST00000462494 NYXQ9GZU5 481 aa19.26■□□□□ 0.67
ACTB-207ENST00000462494 MCM9Q9NXL9 1143 aa19.26■□□□□ 0.67
ACTB-207ENST00000462494 COL5A3P25940 1745 aaPredicted RBP19.25■□□□□ 0.67
ACTB-207ENST00000462494 TEX33O43247 280 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 STX10O60499 249 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 DPYDQ12882 1025 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 SPATA1Q5VX52 437 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 ARPP21Q9UBL0 812 aaPredicted RBP19.25■□□□□ 0.67
ACTB-207ENST00000462494 MORC2Q9Y6X9 1032 aaPredicted RBP19.25■□□□□ 0.67
ACTB-207ENST00000462494 FANCGO15287 622 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 ATP2C1P98194 919 aaPredicted RBP19.25■□□□□ 0.67
ACTB-207ENST00000462494 PTF1AQ7RTS3 328 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 TXNRD3Q86VQ6 643 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 DZIP1Q86YF9 867 aaKnown RBP19.25■□□□□ 0.67
ACTB-207ENST00000462494 ANKRD2Q9GZV1 360 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 BLZF1Q9H2G9 400 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 CASZ1Q86V15 1759 aa19.25■□□□□ 0.67
ACTB-207ENST00000462494 A0A1B0GTH6 734 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 COBLO75128 1261 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 USP17L8P0C7I0 530 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 DMTNQ08495 405 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 GSDMAQ96QA5 445 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 ZPR1O75312 459 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 CUL4BQ13620 913 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 MNS1Q8NEH6 495 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 CPLX3Q8WVH0 158 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 DESI2Q9BSY9 194 aa19.24■□□□□ 0.67
ACTB-207ENST00000462494 GNG11P61952 73 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 PFKFB3Q16875 520 aaPredicted RBP19.23■□□□□ 0.67
ACTB-207ENST00000462494 KAT14Q9H8E8 782 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 DLEC1Q9Y238 1755 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 AKR1B15C9JRZ8 316 aaPredicted RBP19.23■□□□□ 0.67
ACTB-207ENST00000462494 ARHGAP29Q52LW3 1261 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 IQUBQ8NA54 791 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 NARFQ9UHQ1 456 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 CTNND2Q9UQB3 1225 aa19.23■□□□□ 0.67
ACTB-207ENST00000462494 PPP1R3GB7ZBB8 358 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 GNPATO15228 680 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 CASQ1P31415 396 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 KIF5BP33176 963 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 TFAP4Q01664 338 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 PPFIBP1Q86W92 1011 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 IGSF22Q8N9C0 903 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 GPKOWQ92917 476 aaPredicted RBP eCLIP19.22■□□□□ 0.67
ACTB-207ENST00000462494 MTMR7Q9Y216 660 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 CNTNAP4Q9C0A0 1308 aa19.22■□□□□ 0.67
ACTB-207ENST00000462494 IGSF3O75054 1194 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 USP5P45974 858 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 MTF1Q14872 753 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 IL17AQ16552 155 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 SBK1Q52WX2 424 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 CT47A1Q5JQC4 288 aaPredicted RBP19.21■□□□□ 0.67
ACTB-207ENST00000462494 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 APTXQ7Z2E3 356 aaKnown RBP19.21■□□□□ 0.67
ACTB-207ENST00000462494 UBXN4Q92575 508 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 CARD6Q9BX69 1037 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 PARP3Q9Y6F1 533 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 XDHP47989 1333 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 PDS5AQ29RF7 1337 aaKnown RBP19.21■□□□□ 0.67
ACTB-207ENST00000462494 GOLGA6L9A6NEM1 432 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 RBL2Q08999 1139 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 KARSQ15046 597 aaKnown RBP19.21■□□□□ 0.67
ACTB-207ENST00000462494 DYNLL2Q96FJ2 89 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 WDR24Q96S15 920 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 PRDM4Q9UKN5 801 aa19.21■□□□□ 0.67
ACTB-207ENST00000462494 SOWAHDA6NJG2 315 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 CDC25AP30304 524 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 FILIP1LQ4L180 1135 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 RRAGBQ5VZM2 374 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 CREBRFQ8IUR6 639 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 ANKIB1Q9P2G1 1089 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 CCT6AP40227 531 aaKnown RBP19.2■□□□□ 0.66
ACTB-207ENST00000462494 TRAPPC10P48553 1259 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 E2F4Q16254 413 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 CDKAL1Q5VV42 579 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
ACTB-207ENST00000462494 SLC51AQ86UW1 340 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 STAG2Q8N3U4 1231 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 PNMA1Q8ND90 353 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 RASGRP4Q8TDF6 673 aa19.2■□□□□ 0.66
ACTB-207ENST00000462494 CTAGE1Q96RT6 745 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms