RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 STRNO43815 780 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 BCAR3O75815 825 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 PLCD1P51178 756 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 SLC39A5Q6ZMH5 540 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 MAGEB6Q8N7X4 407 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 ARRDC4Q8NCT1 418 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 MOV10L1Q9BXT6 1211 aaKnown RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 CCDC8Q9H0W5 538 aaPredicted RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 TLR7Q9NYK1 1049 aaKnown RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 ATP11BQ9Y2G3 1177 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
CBX3-205ENST00000462165 SMCHD1A6NHR9 2005 aa13.22□□□□□ -0.29
CBX3-205ENST00000462165 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 SEPT4O43236 478 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 ADORA2AP29274 412 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 GABPAQ06546 454 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 COG2Q14746 738 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 SNX17Q15036 470 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 SHHQ15465 462 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 SHCBP1Q8NEM2 672 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 EAF2Q96CJ1 260 aaPredicted RBP13.21□□□□□ -0.29
CBX3-205ENST00000462165 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.29
CBX3-205ENST00000462165 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
CBX3-205ENST00000462165 MAP3K12Q12852 859 aa13.2□□□□□ -0.3
CBX3-205ENST00000462165 SEPT2Q15019 361 aa13.2□□□□□ -0.3
CBX3-205ENST00000462165 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
CBX3-205ENST00000462165 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
CBX3-205ENST00000462165 SPATC1LQ9H0A9 340 aa13.2□□□□□ -0.3
CBX3-205ENST00000462165 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
CBX3-205ENST00000462165 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
CBX3-205ENST00000462165 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
CBX3-205ENST00000462165 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 PLXNA1Q9UIW2 1896 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 A0A1W2PRG0 241 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 COBLO75128 1261 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 ERCC3P19447 782 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
CBX3-205ENST00000462165 TRIM60Q495X7 471 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 C1orf53Q5VUE5 145 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 MAFAQ8NHW3 353 aaPredicted RBP13.19□□□□□ -0.3
CBX3-205ENST00000462165 BADQ92934 168 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 PRDM5Q9NQX1 630 aaPredicted RBP13.19□□□□□ -0.3
CBX3-205ENST00000462165 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 SLC5A4Q9NY91 659 aa13.19□□□□□ -0.3
CBX3-205ENST00000462165 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
CBX3-205ENST00000462165 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
CBX3-205ENST00000462165 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
CBX3-205ENST00000462165 MB21D1Q8N884 522 aa13.18□□□□□ -0.3
CBX3-205ENST00000462165 MROH8Q9H579 483 aa13.18□□□□□ -0.3
CBX3-205ENST00000462165 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
CBX3-205ENST00000462165 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 TRIM43BA6NCK2 446 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
CBX3-205ENST00000462165 ADCYAP1R1P41586 468 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 LRRC41Q15345 812 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 TRIM43Q96BQ3 446 aaPredicted RBP13.17□□□□□ -0.3
CBX3-205ENST00000462165 MAML3Q96JK9 1138 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
CBX3-205ENST00000462165 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
CBX3-205ENST00000462165 EVX2Q03828 476 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 KIAA1755Q5JYT7 1200 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
CBX3-205ENST00000462165 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
CBX3-205ENST00000462165 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
CBX3-205ENST00000462165 TMEM265A0A087WTH1 108 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 TLE2Q04725 743 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 PLS1Q14651 629 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
CBX3-205ENST00000462165 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 DCP1AQ9NPI6 582 aaPredicted RBP13.15□□□□□ -0.3
CBX3-205ENST00000462165 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
CBX3-205ENST00000462165 FLOT1O75955 427 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 SLC25A27O95847 323 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 CLTBP09497 229 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 FCER1AP12319 257 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 PDE6AP16499 860 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 AACSQ86V21 672 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 VCPKMTQ9H867 229 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 ARHGEF10LQ9HCE6 1279 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms