RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 CNMDO75829 334 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 RASA1P20936 1047 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 MAPK4P31152 587 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 STK11IPQ8N1F8 1099 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 LPAR1Q92633 364 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 NACAP1Q9BZK3 213 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 PORCNQ9H237 461 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 MKNK2Q9HBH9 465 aa24.38■■□□□ 1.49
UBE2D4-207ENST00000450743 SPDYE16A6NNV3 312 aaPredicted RBP24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 INHAP05111 366 aa24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 EEF2P13639 858 aaKnown RBP24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 NUCB1Q02818 461 aa24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 COG2Q14746 738 aa24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 CHD1LQ86WJ1 897 aa24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 CCAR1Q8IX12 1150 aaKnown RBP24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 RNF208Q9H0X6 261 aa24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 VCPKMTQ9H867 229 aa24.37■■□□□ 1.49
UBE2D4-207ENST00000450743 A0A0G2JMZ2 1700 aa24.36■■□□□ 1.49
UBE2D4-207ENST00000450743 COL11A1P12107 1806 aaPredicted RBP24.36■■□□□ 1.49
UBE2D4-207ENST00000450743 GJB1P08034 283 aa24.36■■□□□ 1.49
UBE2D4-207ENST00000450743 ATP2B2Q01814 1243 aa24.36■■□□□ 1.49
UBE2D4-207ENST00000450743 TANGO6Q9C0B7 1094 aa24.36■■□□□ 1.49
UBE2D4-207ENST00000450743 UNC93B1Q9H1C4 597 aa24.36■■□□□ 1.49
UBE2D4-207ENST00000450743 CCNA1P78396 465 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 CCDC129Q6ZRS4 1044 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 SPICE1Q8N0Z3 855 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 NUDT12Q9BQG2 462 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 NAPBQ9H115 298 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 HOXC10Q9NYD6 342 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 BTBD7Q9P203 1132 aa24.35■■□□□ 1.49
UBE2D4-207ENST00000450743 ZNFX1Q9P2E3 1918 aaKnown RBP24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 GPR142Q7Z601 462 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 PLEKHH3Q7Z736 793 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 TICAM2Q86XR7 235 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 PLEKHM2Q8IWE5 1019 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 NKX2-3Q8TAU0 364 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 SOCS4Q8WXH5 440 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 SHISA4Q96DD7 197 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 ZNF287Q9HBT7 754 aa24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 MKI67P46013 3256 aaKnown RBP24.34■■□□□ 1.49
UBE2D4-207ENST00000450743 WDR46O15213 610 aaKnown RBP24.33■■□□□ 1.49
UBE2D4-207ENST00000450743 FOXP2O15409 715 aa24.33■■□□□ 1.49
UBE2D4-207ENST00000450743 CYP2B6P20813 491 aa24.33■■□□□ 1.49
UBE2D4-207ENST00000450743 GJA8P48165 433 aa24.33■■□□□ 1.49
UBE2D4-207ENST00000450743 HELLSQ9NRZ9 838 aa24.33■■□□□ 1.49
UBE2D4-207ENST00000450743 PRDM1O75626 825 aa24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 HMGCRP04035 888 aa24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 MORN1Q5T089 497 aa24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 ZNF444Q8N0Y2 327 aaPredicted RBP24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 USP6NLQ92738 828 aa24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 OSBPL3Q9H4L5 887 aa24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 GOPCQ9HD26 462 aa24.32■■□□□ 1.48
UBE2D4-207ENST00000450743 TRIM6-TRIM34B2RNG4 842 aa24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 FLOT1O75955 427 aa24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 XRCC5P13010 732 aaKnown RBP24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 DSG3P32926 999 aa24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 PPARAQ07869 468 aa24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 CWC22Q9HCG8 908 aaKnown RBP24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 NYAP2Q9P242 653 aa24.31■■□□□ 1.48
UBE2D4-207ENST00000450743 SLC3A2P08195 630 aaKnown RBP24.3■■□□□ 1.48
UBE2D4-207ENST00000450743 IRX6P78412 446 aaPredicted RBP24.3■■□□□ 1.48
UBE2D4-207ENST00000450743 PDE4BQ07343 736 aa24.3■■□□□ 1.48
UBE2D4-207ENST00000450743 U2AF1L4Q8WU68 220 aaKnown RBP24.3■■□□□ 1.48
UBE2D4-207ENST00000450743 TRIB2Q92519 343 aa24.3■■□□□ 1.48
UBE2D4-207ENST00000450743 FAM227BQ96M60 508 aa24.3■■□□□ 1.48
UBE2D4-207ENST00000450743 IGKV6D-41A0A0C4DH26 115 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 A0A0D9SFI3 127 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 SGPL1O95470 568 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 RGS2P41220 211 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 MCMDC2Q4G0Z9 681 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 VPS53Q5VIR6 699 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 WDR78Q5VTH9 848 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 PRPF38BQ5VTL8 546 aaKnown RBP24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 MB21D1Q8N884 522 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 RILPL2Q969X0 211 aa24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 PAK6Q9NQU5 681 aaPredicted RBP24.29■■□□□ 1.48
UBE2D4-207ENST00000450743 TRIM32Q13049 653 aa24.28■■□□□ 1.48
UBE2D4-207ENST00000450743 NMIQ13287 307 aaPredicted RBP24.28■■□□□ 1.48
UBE2D4-207ENST00000450743 TRMT44Q8IYL2 757 aaKnown RBP24.28■■□□□ 1.48
UBE2D4-207ENST00000450743 ATG4CQ96DT6 458 aa24.28■■□□□ 1.48
UBE2D4-207ENST00000450743 DEFB118Q96PH6 123 aa24.28■■□□□ 1.48
UBE2D4-207ENST00000450743 MOV10L1Q9BXT6 1211 aaKnown RBP24.28■■□□□ 1.48
UBE2D4-207ENST00000450743 SLC15A5A6NIM6 579 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 RAD21O60216 631 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 PTPREP23469 700 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 MAP2K5Q13163 448 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 ALX1Q15699 326 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 NEDD1Q8NHV4 660 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 SPATC1LQ9H0A9 340 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 FBXO28Q9NVF7 368 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 CLIP2Q9UDT6 1046 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 IVNS1ABPQ9Y6Y0 642 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 CEP290O15078 2479 aa24.27■■□□□ 1.48
UBE2D4-207ENST00000450743 FAM83BQ5T0W9 1011 aa24.26■■□□□ 1.47
UBE2D4-207ENST00000450743 SAMD1Q6SPF0 538 aaPredicted RBP24.26■■□□□ 1.47
UBE2D4-207ENST00000450743 MKL1Q969V6 931 aa24.26■■□□□ 1.47
UBE2D4-207ENST00000450743 CEP95Q96GE4 821 aa24.26■■□□□ 1.47
UBE2D4-207ENST00000450743 APBA2Q99767 749 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms