RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DNM2P50570 870 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 COPB1P53618 953 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 RBL2Q08999 1139 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TTC31Q49AM3 519 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 FAM47AQ5JRC9 791 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 DYDC1Q8WWB3 177 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 CUL5Q93034 780 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PARD6BQ9BYG5 372 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PIH1D3Q9NQM4 214 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ASAP1Q9ULH1 1129 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PCDHB6Q9Y5E3 794 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 UTYO14607 1347 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA6CA6NDK9 693 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 AP5Z1O43299 807 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ZEB2O60315 1214 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TBCAO75347 108 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA6DP0CG33 693 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 SCG2P13521 617 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PLCG2P16885 1265 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PTPREP23469 700 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TFAP4Q01664 338 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 NONOQ15233 471 aaKnown RBP eCLIP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 C8orf74Q6P047 294 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ARMCX5Q6P1M9 558 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 NLRP10Q86W26 655 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 BLIDQ8IZY5 108 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ARFGAP2Q8N6H7 521 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 STRBPQ96SI9 672 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA6AQ9NYA3 693 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA6BA6NDN3 693 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 CCNT1O60563 726 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TNNC1P63316 161 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 CETN1Q12798 172 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ATG9AQ7Z3C6 839 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 KRT25Q7Z3Z0 450 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ZNF804AQ7Z570 1209 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 CCDC84Q86UT8 332 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TBC1D10CQ8IV04 446 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 SMYD4Q8IYR2 804 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ZNF710Q8N1W2 664 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 MKRN1Q9UHC7 482 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 CEP170BQ9Y4F5 1589 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 SOWAHDA6NJG2 315 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 TMEM232C9JQI7 657 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 PRKAB2O43741 272 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 RPN1P04843 607 aaKnown RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 TXKP42681 527 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 GYG1P46976 350 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 FOXO4P98177 505 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 CABP7Q86V35 215 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 TTLL11Q8NHH1 800 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 PANX2Q96RD6 677 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 PDE11AQ9HCR9 933 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 MYO1AQ9UBC5 1043 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 CLTCQ00610 1675 aaKnown RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 DDAH1O94760 285 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 KCNJ6P48051 423 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 E4F1Q66K89 784 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 RBM43Q6ZSC3 357 aaKnown RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 STXBP4Q6ZWJ1 553 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 SND1Q7KZF4 910 aaKnown RBP eCLIP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 OTUD6BQ8N6M0 293 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 LMBR1Q8WVP7 490 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 KAZALD1Q96I82 304 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 GDAP1L1Q96MZ0 367 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 TAOK3Q9H2K8 898 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 VIRMAQ69YN4 1812 aaKnown RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 WDR17Q8IZU2 1322 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA6L10A0A0M3HER8 536 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 CCDC172P0C7W6 258 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 PCP11498 1178 aaKnown RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 RFC4P35249 363 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 TRAPPC10P48553 1259 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 GTF2A1P52655 376 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 RAPGEF1Q13905 1077 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 CYB5R4Q7L1T6 521 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 GIMAP7Q8NHV1 300 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 NOX5Q96PH1 765 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 CARD10Q9BWT7 1032 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 IFIH1Q9BYX4 1025 aaKnown RBP7.47□□□□□ -1.21
CSDE1-205ENST00000438362 MED4Q9NPJ6 270 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 LRWD1Q9UFC0 647 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 AGLP35573 1532 aa7.47□□□□□ -1.21
CSDE1-205ENST00000438362 KIF28PB7ZC32 967 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 GCOM1H8Y6P7 765 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-205ENST00000438362 CTDNEP1O95476 244 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 MYZAPP0CAP1 466 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 LONP1P36776 959 aaKnown RBP7.46□□□□□ -1.21
CSDE1-205ENST00000438362 RFX5P48382 616 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-205ENST00000438362 KIAA0753Q2KHM9 967 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 SHC4Q6S5L8 630 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 CCDC65Q8IXS2 484 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 LCORLQ8N3X6 602 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 ENGASEQ8NFI3 743 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 IQCDQ96DY2 449 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 PSMB7Q99436 277 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 TFCP2L1Q9NZI6 479 aa7.46□□□□□ -1.21
CSDE1-205ENST00000438362 ARPP21Q9UBL0 812 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-205ENST00000438362 ZBTB1Q9Y2K1 713 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms