RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 CDC25BP30305 580 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 IDI1Q13907 227 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 INPP5AQ14642 412 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 CBX2Q14781 532 aaPredicted RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 OVOS1Q6IE37 1185 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 ELMSAN1Q6PJG2 1045 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 GPBAR1Q8TDU6 330 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 MFSD3Q96ES6 412 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 PLPPR2Q96GM1 343 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 REV1Q9UBZ9 1251 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 SLC12A7Q9Y666 1083 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 SETD1AO15047 1707 aaKnown RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 PRR36Q9H6K5 1346 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 AP3B2Q13367 1082 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 NCAPHQ15003 741 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 TM4SF20Q53R12 229 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 NINJ1Q92982 152 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 C14orf93Q9H972 538 aaKnown RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 GMIPQ9P107 970 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 GABBR1Q9UBS5 961 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 PHF24Q9UPV7 400 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 PARD3Q8TEW0 1356 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 ADCY3O60266 1144 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 GSTM4Q03013 218 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 MLECQ14165 292 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 SLC10A6Q3KNW5 377 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 KIAA1211LQ6NV74 962 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 LRFN4Q6PJG9 635 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 THNSL2Q86YJ6 484 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 ZBTB38Q8NAP3 1195 aaPredicted RBP8.16□□□□□ -1.1
SPEN-202ENST00000438066 CHAC2Q8WUX2 184 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 SLC7A3Q8WY07 619 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 ATG4CQ96DT6 458 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 SLC6A14Q9UN76 642 aa8.16□□□□□ -1.1
SPEN-202ENST00000438066 GPR25O00155 361 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 AXIN1O15169 862 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 SUSD5O60279 629 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 DNAJA2O60884 412 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 ECEL1O95672 775 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 PLCG1P19174 1290 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 CABP4P57796 275 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 CT47A1Q5JQC4 288 aaPredicted RBP8.15□□□□□ -1.1
SPEN-202ENST00000438066 ZNF468Q5VIY5 522 aaPredicted RBP8.15□□□□□ -1.1
SPEN-202ENST00000438066 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 TAB3Q8N5C8 712 aaPredicted RBP8.15□□□□□ -1.1
SPEN-202ENST00000438066 UBR7Q8N806 425 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 TRERF1Q96PN7 1200 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 SLC9A7Q96T83 725 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 PHAXQ9H814 394 aaKnown RBP8.15□□□□□ -1.1
SPEN-202ENST00000438066 THRAP3Q9Y2W1 955 aaKnown RBP8.15□□□□□ -1.1
SPEN-202ENST00000438066 A2ML1A8K2U0 1454 aa8.15□□□□□ -1.1
SPEN-202ENST00000438066 CCDC194A0A1B0GVG4 234 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 SLC22A31A6NKX4 558 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 NME1P15531 152 aaKnown RBP8.15□□□□□ -1.11
SPEN-202ENST00000438066 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.11
SPEN-202ENST00000438066 L1CAMP32004 1257 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 STAT3P40763 770 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 LRRC47Q8N1G4 583 aaKnown RBP8.15□□□□□ -1.11
SPEN-202ENST00000438066 SGSM3Q96HU1 749 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 SLC26A8Q96RN1 970 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 PSMD1Q99460 953 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 CACNA2D2Q9NY47 1150 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 KLHL3Q9UH77 587 aa8.15□□□□□ -1.11
SPEN-202ENST00000438066 PDE8AO60658 829 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 SIN3BO75182 1162 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 PEX14O75381 377 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 CDC27P30260 824 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
SPEN-202ENST00000438066 PABPC4Q13310 644 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPEN-202ENST00000438066 BRDTQ58F21 947 aaPredicted RBP8.14□□□□□ -1.11
SPEN-202ENST00000438066 LPIN3Q9BQK8 851 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 RIPOR2Q9Y4F9 1068 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 ALKQ9UM73 1620 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
SPEN-202ENST00000438066 BRD4O60885 1362 aaPredicted RBP8.14□□□□□ -1.11
SPEN-202ENST00000438066 UBR1Q8IWV7 1749 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 A0A087X0B3 334 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 ITGA6P23229 1130 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 EXOSC10Q01780 885 aaKnown RBP8.13□□□□□ -1.11
SPEN-202ENST00000438066 RALBP1Q15311 655 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 LONRF2Q1L5Z9 754 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 FOXB2Q5VYV0 432 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 INTS3Q68E01 1043 aaKnown RBP8.13□□□□□ -1.11
SPEN-202ENST00000438066 HDXQ7Z353 690 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
SPEN-202ENST00000438066 KLHL6Q8WZ60 621 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 CAAP1Q9H8G2 361 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
SPEN-202ENST00000438066 FER1L4A9Z1Z3 1794 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 TULP4Q9NRJ4 1543 aa8.13□□□□□ -1.11
SPEN-202ENST00000438066 H3BRJ5 948 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 KCNQ2O43526 872 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 NFKB2Q00653 900 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms