RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 BLMHQ13867 455 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 MYBPC2Q14324 1141 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 DDB1Q16531 1140 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 CCNJLQ8IV13 435 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 OR2W6PQ8NHA6 318 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 MS4A4AQ96JQ5 239 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 CORO1BQ9BR76 489 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 FAM114A2Q9NRY5 505 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 EHD2Q9NZN4 543 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 ZMYND8Q9ULU4 1186 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 IPO5O00410 1097 aaKnown RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 DPYSL4O14531 572 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 TUBB4AP04350 444 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 MARCKSP29966 332 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 SARSP49591 514 aaKnown RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 ADAM9Q13443 819 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 SAFB2Q14151 953 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 CEP85Q6P2H3 762 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 SLF2Q8IX21 1173 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 EHBP1Q8NDI1 1231 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 SPIRE2Q8WWL2 714 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 DUSP9Q99956 384 aaKnown RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 PLVAPQ9BX97 442 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 ARHGEF38Q9NXL2 777 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 DMGDHQ9UI17 866 aaKnown RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 PAIP2BQ9ULR5 123 aaKnown RBP7.62□□□□□ -1.19
CNOT4-205ENST00000423368 CD2APQ9Y5K6 639 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 IVNS1ABPQ9Y6Y0 642 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 ITIH6Q6UXX5 1313 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 TRIM43BA6NCK2 446 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 EIF3FO00303 357 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 CETN3O15182 167 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 VIL1P09327 827 aaKnown RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 NR1D1P20393 614 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 PIP4K2BP78356 416 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 PTH1RQ03431 593 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 ISLR2Q6UXK2 745 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 ATP11CQ8NB49 1132 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 OPTNQ96CV9 577 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC43Q96MW1 224 aaKnown RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 LRRC27Q9C0I9 530 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TAOK3Q9H2K8 898 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 CFAP45Q9UL16 551 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 LEMD3Q9Y2U8 911 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 CDC25AP30304 524 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 GNAQP50148 359 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 USP11P51784 963 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 INHBCP55103 352 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TTLL12Q14166 644 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 RAB11FIP4Q86YS3 637 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.61□□□□□ -1.197e-7■■■■□ 23.2
CNOT4-205ENST00000423368 CACNA2D3Q8IZS8 1091 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 FAM133AQ8N9E0 248 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 UCMAQ8WVF2 138 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 NAF1Q96HR8 494 aaKnown RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 NR1H4Q96RI1 486 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 SLX1AQ9BQ83 275 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 CFAP74Q9C0B2 1584 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 SLC5A4Q9NY91 659 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 FBXO9Q9UK97 447 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 N6AMT1Q9Y5N5 214 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 ZSCAN5CA6NGD5 496 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TSPY2A6NKD2 308 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 STXBP3O00186 592 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 KRT38O76015 456 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 SPATA31D3P0C874 917 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TSPY3P0CV98 308 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TSPY8P0CW00 308 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 AARSP49588 968 aaKnown RBP eCLIP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 VPS41P49754 854 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 STX17P56962 302 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TSPY1Q01534 308 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC92Q53HC0 331 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 RBM43Q6ZSC3 357 aaKnown RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 SPATA31D4Q6ZUB0 917 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 MIPOL1Q8TD10 442 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 DNAJC1Q96KC8 554 aaKnown RBP7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TTC14Q96N46 770 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 PHF12Q96QT6 1004 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 SH3GL2Q99962 352 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 EMILIN3Q9NT22 766 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 KIAA1468Q9P260 1216 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 TAF6LQ9Y6J9 622 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 KDRP35968 1356 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 PLB1Q6P1J6 1458 aa7.61□□□□□ -1.19
CNOT4-205ENST00000423368 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 KDM5DQ9BY66 1539 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 E2F6O75461 281 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ZCCHC18P0CG32 403 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 PYGMP11217 842 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ALDH3A1P30838 453 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 PPP1R2P41236 205 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 USP14P54578 494 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 PDIA6Q15084 440 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms