RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZNF236Q9UL36 1845 aa12.18□□□□□ -0.46
MDC1-202ENST00000416571 TTC28Q96AY4 2481 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 MAGEB6P1A0A0J9YX57 407 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 STRNO43815 780 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 ADORA2AP29274 412 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 SHMT1P34896 483 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 PLS1Q14651 629 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 SEPT2Q15019 361 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 GUCD1Q96NT3 240 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 MOV10L1Q9BXT6 1211 aaKnown RBP12.17□□□□□ -0.46
MDC1-202ENST00000416571 CRNKL1Q9BZJ0 848 aaKnown RBP12.17□□□□□ -0.46
MDC1-202ENST00000416571 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
MDC1-202ENST00000416571 MYH8P13535 1937 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 RLFQ13129 1914 aa12.17□□□□□ -0.46
MDC1-202ENST00000416571 SEPT4O43236 478 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 PLCD1P51178 756 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
MDC1-202ENST00000416571 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 SLC39A5Q6ZMH5 540 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 AACSQ86V21 672 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 ERC1Q8IUD2 1116 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 SHCBP1Q8NEM2 672 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 TRPV1Q8NER1 839 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 SPATC1LQ9H0A9 340 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 ANTXR1Q9H6X2 564 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
MDC1-202ENST00000416571 ERCC3P19447 782 aa12.15□□□□□ -0.46
MDC1-202ENST00000416571 SHHQ15465 462 aa12.15□□□□□ -0.46
MDC1-202ENST00000416571 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
MDC1-202ENST00000416571 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
MDC1-202ENST00000416571 MB21D1Q8N884 522 aa12.15□□□□□ -0.46
MDC1-202ENST00000416571 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
MDC1-202ENST00000416571 MROH8Q9H579 483 aa12.15□□□□□ -0.46
MDC1-202ENST00000416571 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
MDC1-202ENST00000416571 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 FLOT1O75955 427 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 GUCY1A2P33402 732 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 SLC9C2Q5TAH2 1124 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 BADQ92934 168 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 SNX27Q96L92 541 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
MDC1-202ENST00000416571 A0A1W2PRG0 241 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 FCER1AP12319 257 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 DSG3P32926 999 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 GABPAQ06546 454 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 ABRAQ8N0Z2 381 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
MDC1-202ENST00000416571 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 EYSQ5T1H1 3165 aa12.13□□□□□ -0.47
MDC1-202ENST00000416571 COBLO75128 1261 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 IGHA2P01877 340 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 RARBP10826 455 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 PDE6AP16499 860 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 ICA1Q05084 483 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 SNX17Q15036 470 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 LRRC41Q15345 812 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 PRAMEF19Q5SWL8 479 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 C9orf50Q5SZB4 431 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 AMOTL1Q8IY63 956 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
MDC1-202ENST00000416571 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 MAML3Q96JK9 1138 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
MDC1-202ENST00000416571 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 DCP1AQ9NPI6 582 aaPredicted RBP12.12□□□□□ -0.47
MDC1-202ENST00000416571 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
MDC1-202ENST00000416571 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
MDC1-202ENST00000416571 GOLIM4O00461 696 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 SLC25A27O95847 323 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
MDC1-202ENST00000416571 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 RNF180Q86T96 592 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 SLC44A5Q8NCS7 719 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 VCPKMTQ9H867 229 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 IL1RAPL2Q9NP60 686 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 TMX2Q9Y320 296 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
MDC1-202ENST00000416571 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
MDC1-202ENST00000416571 PLXNA1Q9UIW2 1896 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 WDR46O15213 610 aaKnown RBP12.1□□□□□ -0.47
MDC1-202ENST00000416571 RAD21O60216 631 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms