RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 HLA-DOAP06340 250 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 SLC3A2P08195 630 aaKnown RBP9.17□□□□□ -0.94
RBM39-209ENST00000416529 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 TBC1D10BQ4KMP7 808 aaPredicted RBP9.17□□□□□ -0.94
RBM39-209ENST00000416529 KRT26Q7Z3Y9 468 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 METTL16Q86W50 562 aaKnown RBP9.17□□□□□ -0.94
RBM39-209ENST00000416529 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 TEX11Q8IYF3 940 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 ZNF384Q8TF68 577 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 STRBPQ96SI9 672 aaKnown RBP9.17□□□□□ -0.94
RBM39-209ENST00000416529 ATP13A2Q9NQ11 1180 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 PRDM10Q9NQV6 1147 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 SWAP70Q9UH65 585 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 FOCADQ5VW36 1801 aa9.17□□□□□ -0.94
RBM39-209ENST00000416529 PDE4DIPQ5VU43 2346 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 CCDC171Q6TFL3 1326 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 POLR2AP24928 1970 aaKnown RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 F8W031 263 aaPredicted RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 GPAA1O43292 621 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 WDHD1O75717 1129 aaPredicted RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 GSPT1P15170 499 aaKnown RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 CHMLP26374 656 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 VEGFBP49765 207 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 HIRAP54198 1017 aaPredicted RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 MLLT1Q03111 559 aaPredicted RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 NBPF9Q3BBW0 867 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 PRPF38BQ5VTL8 546 aaKnown RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 KIAA1211Q6ZU35 1233 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 TRPM4Q8TD43 1214 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 DEFB129Q9H1M3 183 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 AATFQ9NY61 560 aaKnown RBP eCLIP9.16□□□□□ -0.94
RBM39-209ENST00000416529 GGA3Q9NZ52 723 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
RBM39-209ENST00000416529 MYO5AQ9Y4I1 1855 aaKnown RBP9.16□□□□□ -0.94
RBM39-209ENST00000416529 CNTNAP1P78357 1384 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 SGSM2O43147 1006 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 USP5P45974 858 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 CCDC178Q5BJE1 867 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 ANGEL2Q5VTE6 544 aaKnown RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 PTCRAQ6ISU1 281 aaPredicted RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 ARMC9Q7Z3E5 817 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 OSBP2Q969R2 916 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 CCDC17Q96LX7 622 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 MTA3Q9BTC8 594 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 MXD3Q9BW11 206 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 OSBPL5Q9H0X9 879 aaPredicted RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 RNF41Q9H4P4 317 aaPredicted RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 TDRD3Q9H7E2 651 aaKnown RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 ABT1Q9ULW3 272 aaKnown RBP9.15□□□□□ -0.94
RBM39-209ENST00000416529 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 JAG2Q9Y219 1238 aa9.15□□□□□ -0.94
RBM39-209ENST00000416529 TRPM7Q96QT4 1865 aa9.15□□□□□ -0.95
RBM39-209ENST00000416529 FLT1P17948 1338 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 PASKQ96RG2 1323 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 SPTLC1O15269 473 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 MBD4O95243 580 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 RGS3P49796 1198 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 RASA3Q14644 834 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 GRIK5Q16478 980 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 HPS1Q92902 700 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 PUS7LQ9H0K6 701 aaKnown RBP9.14□□□□□ -0.95
RBM39-209ENST00000416529 DCP1AQ9NPI6 582 aaPredicted RBP9.14□□□□□ -0.95
RBM39-209ENST00000416529 SERPINB13Q9UIV8 391 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 ANAPC4Q9UJX5 808 aa9.14□□□□□ -0.95
RBM39-209ENST00000416529 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 HSPA8P11142 646 aaKnown RBP9.13□□□□□ -0.95
RBM39-209ENST00000416529 VARSP26640 1264 aaKnown RBP9.13□□□□□ -0.95
RBM39-209ENST00000416529 SH3BP2P78314 561 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 PDE4BQ07343 736 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 TSHZ3Q63HK5 1081 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 ADGRA1Q86SQ6 560 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 C2orf69Q8N8R5 385 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 EDC3Q96F86 508 aaKnown RBP9.13□□□□□ -0.95
RBM39-209ENST00000416529 TRIM47Q96LD4 638 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 TEPSINQ96N21 525 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 ESYT1Q9BSJ8 1104 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 ZNF341Q9BYN7 854 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 NAPBQ9H115 298 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 VEZTQ9HBM0 779 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 ZNF112Q9UJU3 913 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 SLC4A4Q9Y6R1 1079 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 MYH1P12882 1939 aa9.13□□□□□ -0.95
RBM39-209ENST00000416529 PAPPA2Q9BXP8 1791 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 GSG1L2A8MUP6 293 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 SIAH2O43255 324 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 CTNND1O60716 968 aaKnown RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 POLR3DP05423 398 aaPredicted RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 FGRP09769 529 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 HSPD1P10809 573 aaKnown RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 NMIQ13287 307 aaPredicted RBP9.12□□□□□ -0.95
RBM39-209ENST00000416529 KRT32Q14532 448 aa9.12□□□□□ -0.95
RBM39-209ENST00000416529 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms