RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RABEP1Q15276 862 aa19.43■□□□□ 0.7
TSPAN4-208ENST00000409531 FAM47AQ5JRC9 791 aa19.43■□□□□ 0.7
TSPAN4-208ENST00000409531 UBAC1Q9BSL1 405 aa19.43■□□□□ 0.7
TSPAN4-208ENST00000409531 ZBTB21Q9ULJ3 1066 aa19.43■□□□□ 0.7
TSPAN4-208ENST00000409531 ERICH2A1L162 156 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 AKR1B1P15121 316 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 RPS6KB1P23443 525 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 RGS19P49795 217 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 GPAT2Q6NUI2 795 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 TMEM87BQ96K49 555 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 TCP11L1Q9NUJ3 509 aa19.42■□□□□ 0.7
TSPAN4-208ENST00000409531 MYH4Q9Y623 1939 aa19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 PRC1O43663 620 aa19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 TLR2O60603 784 aa19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 GH2P01242 217 aa19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 SHROOM1Q2M3G4 852 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 GADL1Q6ZQY3 521 aa19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 KIF2CQ99661 725 aa19.41■□□□□ 0.7
TSPAN4-208ENST00000409531 FGD1P98174 961 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 EXOSC10Q01780 885 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 SP3Q02447 781 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 DGKZQ13574 1117 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 SH3D19Q5HYK7 790 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 CYB5R4Q7L1T6 521 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 CTU1Q7Z7A3 348 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 UPF3BQ9BZI7 483 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 KANSL2Q9H9L4 492 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 SLC45A1Q9Y2W3 748 aa19.4■□□□□ 0.7
TSPAN4-208ENST00000409531 C19orf81C9J6K1 198 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 USP17L10C9JJH3 530 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 IFIT3O14879 490 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 NEK4P51957 841 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 BACE1P56817 501 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 ANTXR2P58335 489 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 TTC14Q96N46 770 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 ZSCAN10Q96SZ4 725 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 PDRG1Q9NUG6 133 aa19.39■□□□□ 0.69
TSPAN4-208ENST00000409531 TNKSO95271 1327 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 HMGCS2P54868 508 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 RAB3GAP1Q15042 981 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 DGKHQ86XP1 1220 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 TMTC2Q8N394 836 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 FBXL16Q8N461 479 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 ERO1AQ96HE7 468 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 MCOLN1Q9GZU1 580 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 MTMR4Q9NYA4 1195 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 AGTPBP1Q9UPW5 1226 aa19.38■□□□□ 0.69
TSPAN4-208ENST00000409531 IGKV6D-41A0A0C4DH26 115 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 ST18O60284 1047 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 TTLL1O95922 423 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 CPA1P15085 419 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 ICA1Q05084 483 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 MTMR2Q13614 643 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 WTAPQ15007 396 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 SEPT2Q15019 361 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 TMEM67Q5HYA8 995 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 C17orf99Q6UX52 265 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 CEP95Q96GE4 821 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 PARK7Q99497 189 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 ZKSCAN3Q9BRR0 538 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 ALDH8A1Q9H2A2 487 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 IL17RBQ9NRM6 502 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 NYAP2Q9P242 653 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 PCDH10Q9P2E7 1040 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 PHIPQ8WWQ0 1821 aa19.37■□□□□ 0.69
TSPAN4-208ENST00000409531 CYP2C8P10632 490 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 LIFRP42702 1097 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 PKN2Q16513 984 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 ENAHQ8N8S7 591 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 IGDCC4Q8TDY8 1250 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 SH2D4AQ9H788 454 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 ARHGEF10LQ9HCE6 1279 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 TMOD4Q9NZQ9 345 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 STX8Q9UNK0 236 aa19.36■□□□□ 0.69
TSPAN4-208ENST00000409531 SH2B2O14492 632 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 NMT2O60551 498 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 GUCY1A2P33402 732 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 NOVP48745 357 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 PABPC4Q13310 644 aaKnown RBP eCLIP19.35■□□□□ 0.693e-8■■■■■ 35.6
TSPAN4-208ENST00000409531 COL9A3Q14050 684 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 SEC23AQ15436 765 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 TREML2Q5T2D2 321 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 IFIT1BQ5T764 474 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 Q6ZUG5 572 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 ANKS1AQ92625 1134 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 TCEANC2Q96MN5 208 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 SYNPO2Q9UMS6 1093 aa19.35■□□□□ 0.69
TSPAN4-208ENST00000409531 ARHGEF6Q15052 776 aa19.34■□□□□ 0.69
TSPAN4-208ENST00000409531 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
TSPAN4-208ENST00000409531 LRRC2Q9BYS8 371 aa19.34■□□□□ 0.69
TSPAN4-208ENST00000409531 AGXT2Q9BYV1 514 aa19.34■□□□□ 0.69
TSPAN4-208ENST00000409531 CPA4Q9UI42 421 aa19.34■□□□□ 0.69
TSPAN4-208ENST00000409531 PNMA3Q9UL41 463 aa19.34■□□□□ 0.69
TSPAN4-208ENST00000409531 ADGRA2Q96PE1 1338 aa19.33■□□□□ 0.69
TSPAN4-208ENST00000409531 CCDC69A6NI79 296 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms