RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 VCPKMTQ9H867 229 aa16.65■□□□□ 0.26
VAMP2-202ENST00000404970 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
VAMP2-202ENST00000404970 ZNF213O14771 459 aa16.64■□□□□ 0.25
VAMP2-202ENST00000404970 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
VAMP2-202ENST00000404970 ECM2O94769 699 aaPredicted RBP16.64■□□□□ 0.25
VAMP2-202ENST00000404970 CYP21A2P08686 494 aa16.64■□□□□ 0.25
VAMP2-202ENST00000404970 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
VAMP2-202ENST00000404970 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
VAMP2-202ENST00000404970 MAP4K1Q92918 833 aa16.64■□□□□ 0.25
VAMP2-202ENST00000404970 ZNF287Q9HBT7 754 aa16.64■□□□□ 0.25
VAMP2-202ENST00000404970 TXNRD2Q9NNW7 524 aa16.64■□□□□ 0.25
VAMP2-202ENST00000404970 CLIP2Q9UDT6 1046 aa16.64■□□□□ 0.25
VAMP2-202ENST00000404970 TSPY2A6NKD2 308 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 NOVP48745 357 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 HERVK_113P62684 666 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 STOX1Q6ZVD7 989 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
VAMP2-202ENST00000404970 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
VAMP2-202ENST00000404970 CENPFP49454 3210 aa16.63■□□□□ 0.25
VAMP2-202ENST00000404970 CNMDO75829 334 aa16.62■□□□□ 0.25
VAMP2-202ENST00000404970 LACTBP83111 547 aaPredicted RBP16.62■□□□□ 0.25
VAMP2-202ENST00000404970 IMMTQ16891 758 aaKnown RBP16.62■□□□□ 0.25
VAMP2-202ENST00000404970 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
VAMP2-202ENST00000404970 SMCR8Q8TEV9 937 aaPredicted RBP16.62■□□□□ 0.25
VAMP2-202ENST00000404970 MKL1Q969V6 931 aa16.62■□□□□ 0.25
VAMP2-202ENST00000404970 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
VAMP2-202ENST00000404970 PNMA3Q9UL41 463 aa16.62■□□□□ 0.25
VAMP2-202ENST00000404970 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
VAMP2-202ENST00000404970 SPDYE16A6NNV3 312 aaPredicted RBP16.61■□□□□ 0.25
VAMP2-202ENST00000404970 B4E1Z4 1266 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 CAPN15O75808 1086 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 TTLL1O95922 423 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 NDUFB10O96000 172 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 OSBPP22059 807 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
VAMP2-202ENST00000404970 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
VAMP2-202ENST00000404970 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 OTOP1Q7RTM1 612 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 CTU1Q7Z7A3 348 aaKnown RBP16.61■□□□□ 0.25
VAMP2-202ENST00000404970 TRIM47Q96LD4 638 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 MCOLN1Q9GZU1 580 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 FBXO28Q9NVF7 368 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 RBPJLQ9UBG7 517 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 KDM4AO75164 1064 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 LPAR1Q92633 364 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
VAMP2-202ENST00000404970 F5H6K3 240 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 WDR46O15213 610 aaKnown RBP16.6■□□□□ 0.25
VAMP2-202ENST00000404970 KLRC3Q07444 240 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 FAM110CQ1W6H9 321 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 Q3C1V9 767 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 CHMP4CQ96CF2 233 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 ERO1AQ96HE7 468 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 RNF41Q9H4P4 317 aaPredicted RBP16.6■□□□□ 0.25
VAMP2-202ENST00000404970 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 BTBD7Q9P203 1132 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 MORF4L1Q9UBU8 362 aa16.6■□□□□ 0.25
VAMP2-202ENST00000404970 RAD21O60216 631 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
VAMP2-202ENST00000404970 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 TNS4Q8IZW8 715 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 GMCL1P1Q8NEA9 526 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 STX8Q9UNK0 236 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
VAMP2-202ENST00000404970 E7EWF7 191 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 SLC27A2O14975 620 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 PSMC4P43686 418 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
VAMP2-202ENST00000404970 LBX2Q6XYB7 198 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 ESR2Q92731 530 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 ATG4CQ96DT6 458 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 PAGR1Q9BTK6 254 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
VAMP2-202ENST00000404970 PORCNQ9H237 461 aa16.57■□□□□ 0.24
VAMP2-202ENST00000404970 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
VAMP2-202ENST00000404970 FLOT1O75955 427 aa16.56■□□□□ 0.24
VAMP2-202ENST00000404970 DSG3P32926 999 aa16.56■□□□□ 0.24
VAMP2-202ENST00000404970 ANTXR2P58335 489 aa16.56■□□□□ 0.24
VAMP2-202ENST00000404970 ERVK-9P63128 1117 aa16.56■□□□□ 0.24
VAMP2-202ENST00000404970 ERVK-24P63145 666 aa16.56■□□□□ 0.24
VAMP2-202ENST00000404970 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms