RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SH2D4AQ9H788 454 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 KANSL2Q9H9L4 492 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 HOXC10Q9NYD6 342 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 STAP2Q9UGK3 403 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 TMX2Q9Y320 296 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
SDF4-203ENST00000403997 RBBP6Q7Z6E9 1792 aaKnown RBP15.91■□□□□ 0.14
SDF4-203ENST00000403997 SPDYE16A6NNV3 312 aaPredicted RBP15.91■□□□□ 0.14
SDF4-203ENST00000403997 CNMDO75829 334 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
SDF4-203ENST00000403997 KIAA1755Q5JYT7 1200 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 ZMYM1Q5SVZ6 1142 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 B4GALNT3Q6L9W6 998 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 PLEKHH3Q7Z736 793 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 IFNL3Q8IZI9 196 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 SPICE1Q8N0Z3 855 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 EVI5LQ96CN4 794 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 NACAP1Q9BZK3 213 aa15.91■□□□□ 0.14
SDF4-203ENST00000403997 EPB41L4AQ9HCS5 686 aaPredicted RBP15.91■□□□□ 0.14
SDF4-203ENST00000403997 IGHDP01880 384 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 WDR78Q5VTH9 848 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 GPR142Q7Z601 462 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 SOCS4Q8WXH5 440 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 LPAR1Q92633 364 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 VCPKMTQ9H867 229 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 BTBD7Q9P203 1132 aa15.9■□□□□ 0.14
SDF4-203ENST00000403997 RAD21O60216 631 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 SGPL1O95470 568 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 TFRCP02786 760 aaKnown RBP15.89■□□□□ 0.13
SDF4-203ENST00000403997 HMGCRP04035 888 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 RASA1P20936 1047 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
SDF4-203ENST00000403997 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.13
SDF4-203ENST00000403997 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
SDF4-203ENST00000403997 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 NAPBQ9H115 298 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 ZNF287Q9HBT7 754 aa15.89■□□□□ 0.13
SDF4-203ENST00000403997 MYH8P13535 1937 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 FLOT1O75955 427 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 XRCC5P13010 732 aaKnown RBP15.88■□□□□ 0.13
SDF4-203ENST00000403997 RGS2P41220 211 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 CCDC129Q6ZRS4 1044 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 TRIB2Q92519 343 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 DEFB118Q96PH6 123 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.88■□□□□ 0.13
SDF4-203ENST00000403997 GOPCQ9HD26 462 aa15.88■□□□□ 0.13
SDF4-203ENST00000403997 WDR46O15213 610 aaKnown RBP15.87■□□□□ 0.13
SDF4-203ENST00000403997 PRDM1O75626 825 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
SDF4-203ENST00000403997 DSG3P32926 999 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 TRIM32Q13049 653 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 MORN1Q5T089 497 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 CHD1LQ86WJ1 897 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
SDF4-203ENST00000403997 USP6NLQ92738 828 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.87■□□□□ 0.133e-7■■■■□ 22.6
SDF4-203ENST00000403997 HMX1Q9NP08 348 aaPredicted RBP15.87■□□□□ 0.13
SDF4-203ENST00000403997 PAK6Q9NQU5 681 aaPredicted RBP15.87■□□□□ 0.13
SDF4-203ENST00000403997 IVNS1ABPQ9Y6Y0 642 aa15.87■□□□□ 0.13
SDF4-203ENST00000403997 TRIM6-TRIM34B2RNG4 842 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
SDF4-203ENST00000403997 PTPREP23469 700 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 PDE4BQ07343 736 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 MAP2K5Q13163 448 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 PLS1Q14651 629 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 MB21D1Q8N884 522 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 HELLSQ9NRZ9 838 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 NYAP2Q9P242 653 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 RPTORQ8N122 1335 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 ROBO3Q96MS0 1386 aa15.86■□□□□ 0.13
SDF4-203ENST00000403997 SLC15A5A6NIM6 579 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 FARP2O94887 1054 aaPredicted RBP15.85■□□□□ 0.13
SDF4-203ENST00000403997 CAPN2P17655 700 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 NUCB1Q02818 461 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 PPARAQ07869 468 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 ATG4CQ96DT6 458 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 APBA2Q99767 749 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 MOV10L1Q9BXT6 1211 aaKnown RBP15.85■□□□□ 0.13
SDF4-203ENST00000403997 SPATC1LQ9H0A9 340 aa15.85■□□□□ 0.13
SDF4-203ENST00000403997 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
SDF4-203ENST00000403997 CCL14Q16627 93 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 MCMDC2Q4G0Z9 681 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 FAM83BQ5T0W9 1011 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 PLEKHM2Q8IWE5 1019 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 DPF3Q92784 378 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 FAM227BQ96M60 508 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 CRISPLD2Q9H0B8 497 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 FBXO28Q9NVF7 368 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 PLXNB2O15031 1838 aa15.84■□□□□ 0.13
SDF4-203ENST00000403997 F5H6K3 240 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 TSPY3P0CV98 308 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 TSPY8P0CW00 308 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 ERCC3P19447 782 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 TFAP4Q01664 338 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 KLRC3Q07444 240 aa15.83■□□□□ 0.12
SDF4-203ENST00000403997 CACNB2Q08289 660 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms