RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 BLIDQ8IZY5 108 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 DESI2Q9BSY9 194 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 C21orf2O43822 256 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 PLCB3Q01970 1234 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 POLA2Q14181 598 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 RABEP2Q9H5N1 569 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 FRMD4BQ9Y2L6 1034 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 PAXBP1Q9Y5B6 917 aa16.32■□□□□ 0.2
PSME4-201ENST00000389993 PPM1FP49593 454 aaPredicted RBP16.31■□□□□ 0.2
PSME4-201ENST00000389993 CELF1Q92879 486 aaKnown RBP16.31■□□□□ 0.2
PSME4-201ENST00000389993 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
PSME4-201ENST00000389993 SLC39A2Q9NP94 309 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 NOP56O00567 594 aaKnown RBP16.31■□□□□ 0.2
PSME4-201ENST00000389993 PTGDRQ13258 359 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 ARHGAP44Q17R89 818 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
PSME4-201ENST00000389993 PCDHB13Q9Y5F0 798 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 CYP2J2P51589 502 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 ICA1Q05084 483 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 SPAG1Q07617 926 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.23e-8■■■□□ 17.1
PSME4-201ENST00000389993 XDHP47989 1333 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 AFF2P51816 1311 aa16.31■□□□□ 0.2
PSME4-201ENST00000389993 PRDX5P30044 214 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 SH3RF3Q8TEJ3 882 aaPredicted RBP16.3■□□□□ 0.2
PSME4-201ENST00000389993 SLF1Q9BQI6 1058 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 GBP3Q9H0R5 595 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 NRBP1Q9UHY1 535 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
PSME4-201ENST00000389993 MMP10P09238 476 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 CSRNP2Q9H175 543 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 CLCN1P35523 988 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 UBE2SQ16763 222 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 TACC1O75410 805 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 EPB41P11171 864 aaKnown RBP16.3■□□□□ 0.2
PSME4-201ENST00000389993 HOOK3Q86VS8 718 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
PSME4-201ENST00000389993 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
PSME4-201ENST00000389993 SCG2P13521 617 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 SLC44A5Q8NCS7 719 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 CCDC97Q96F63 343 aaPredicted RBP16.29■□□□□ 0.2
PSME4-201ENST00000389993 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 MEIS1O00470 390 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
PSME4-201ENST00000389993 CIAO1O76071 339 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
PSME4-201ENST00000389993 SCARF1Q14162 830 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
PSME4-201ENST00000389993 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 TBC1D22AQ8WUA7 517 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 GDAP1L1Q96MZ0 367 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 DNM3Q9UQ16 869 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 ZBED4O75132 1171 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 FAM102BQ5T8I3 360 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 APOA5Q6Q788 366 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 NSUN7Q8NE18 718 aaKnown RBP16.29■□□□□ 0.2
PSME4-201ENST00000389993 IMPG2Q9BZV3 1241 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 TRIM31Q9BZY9 425 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 ZBTB7AO95365 584 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 FNBP1Q96RU3 617 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 H7C1D1 291 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
PSME4-201ENST00000389993 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 PIGSQ96S52 555 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 PPP1R16BQ96T49 567 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
PSME4-201ENST00000389993 KRT19P08727 400 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 GPBP1Q86WP2 473 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 SERPINA10Q9UK55 444 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 RGS12O14924 1447 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 CPS1P31327 1500 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 FLOT1O75955 427 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■■■□ 25.6
PSME4-201ENST00000389993 ABCB5Q2M3G0 1257 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 CCDC114Q96M63 670 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 DDX25Q9UHL0 483 aaKnown RBP16.28■□□□□ 0.2
PSME4-201ENST00000389993 NEDD4P46934 1319 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 LRRC41Q15345 812 aa16.28■□□□□ 0.2
PSME4-201ENST00000389993 ADGRB3O60242 1522 aa16.27■□□□□ 0.2
PSME4-201ENST00000389993 KRT86O43790 486 aa16.27■□□□□ 0.2
PSME4-201ENST00000389993 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
PSME4-201ENST00000389993 SMCR8Q8TEV9 937 aaPredicted RBP16.27■□□□□ 0.2
PSME4-201ENST00000389993 GOLGA6L10A0A0M3HER8 536 aa16.27■□□□□ 0.2
PSME4-201ENST00000389993 IGBP1P78318 339 aa16.27■□□□□ 0.2
PSME4-201ENST00000389993 FANCLQ9NW38 375 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms