RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 PFKFB2O60825 505 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 TCP1P17987 556 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 CMA1P23946 247 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 KCNJ14Q9UNX9 436 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 STK38LQ9Y2H1 464 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 DNMT1P26358 1616 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 ATP5JP18859 108 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 PHBP35232 272 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 CDAN1Q8IWY9 1227 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 RIPOR2Q9Y4F9 1068 aa18.9■□□□□ 0.62
SNAPC3-202ENST00000380821 TRIM37O94972 964 aa18.89■□□□□ 0.62
SNAPC3-202ENST00000380821 SH3BP5O60239 455 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 DNM2P50570 870 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 CCDC89Q8N998 374 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 TXNDC9O14530 226 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 SNCBQ16143 134 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 MYCT1Q8N699 235 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 FAM207AQ9NSI2 230 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 HIBADHP31937 336 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 ACSBG1Q96GR2 724 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 MRPL44Q9H9J2 332 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 PFDN4Q9NQP4 134 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 GCNT3O95395 438 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 GBP7Q8N8V2 638 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 ANKRD42Q8N9B4 389 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 RABGGTAQ92696 567 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 VEZTQ9HBM0 779 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 ZSWIM6Q9HCJ5 1215 aa18.89■□□□□ 0.61
SNAPC3-202ENST00000380821 HIP1RO75146 1068 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 DCUN1D2Q6PH85 259 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 MTMR6Q9Y217 621 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 USTQ9Y2C2 406 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 ATP10BO94823 1461 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 KRIT1O00522 736 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 HGSO14964 777 aaPredicted RBP18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 EXOC3O60645 756 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 ATP2A3Q93084 1043 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 ARHGEF10LQ9HCE6 1279 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 FAN1Q9Y2M0 1017 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 DAPK3O43293 454 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 MGARPQ8TDB4 240 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 LPIN2Q92539 896 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 GSPT1P15170 499 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 CCDC13Q8IYE1 715 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 TSC1Q92574 1164 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 MYL10Q9BUA6 226 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 MAST3O60307 1309 aa18.88■□□□□ 0.61
SNAPC3-202ENST00000380821 PKD2L1Q9P0L9 805 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 ZNF790Q6PG37 636 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 NOSTRINQ8IVI9 506 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 RUNDC3BQ96NL0 473 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 NELFCDQ8IXH7 590 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 DESI2Q9BSY9 194 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 MYO1AQ9UBC5 1043 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 H7C1D1 291 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 KCNK3O14649 394 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 Q9H521 79 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 TYW1Q9NV66 732 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 TBC1D7Q9P0N9 293 aa18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-202ENST00000380821 MAP3K19Q56UN5 1328 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 GDAP1L1Q96MZ0 367 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 RILPQ96NA2 401 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 HARSP12081 509 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 TDRD7Q8NHU6 1098 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 BCAS4Q8TDM0 211 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 GIPC1O14908 333 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 GCKP35557 465 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 PHLPP2Q6ZVD8 1323 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 LRMPQ12912 555 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 CCDC170Q8IYT3 715 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 ZNF532Q9HCE3 1301 aa18.86■□□□□ 0.61
SNAPC3-202ENST00000380821 DDB1Q16531 1140 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 SPATA1Q5VX52 437 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 PZPP20742 1482 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 RNF168Q8IYW5 571 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 VCX3AQ9NNX9 186 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 KDM5AP29375 1690 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 YWHAEP62258 255 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 CCDC117Q8IWD4 279 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 PPP4R1Q8TF05 950 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 RNF34Q969K3 372 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 GTPBP6O43824 516 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 STAT1P42224 750 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 IRX5P78411 483 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 BBOF1Q8ND07 529 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
SNAPC3-202ENST00000380821 USP28Q96RU2 1077 aa18.84■□□□□ 0.61
SNAPC3-202ENST00000380821 KRT12Q99456 494 aa18.84■□□□□ 0.61
SNAPC3-202ENST00000380821 VPS54Q9P1Q0 977 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms