RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
POLR1E-202ENST00000377798 SCAND2PQ9GZW5 306 aaPredicted RBP17.13■□□□□ 0.33
POLR1E-202ENST00000377798 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
POLR1E-202ENST00000377798 PALM3A6NDB9 673 aaPredicted RBP17.12■□□□□ 0.33
POLR1E-202ENST00000377798 EGFRP00533 1210 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 ATL3Q6DD88 541 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 CLEC10AQ8IUN9 316 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 RBM27Q9P2N5 1060 aaKnown RBP17.12■□□□□ 0.33
POLR1E-202ENST00000377798 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 ELP1O95163 1332 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 MBD3O95983 291 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 PARP1P09874 1014 aaKnown RBP17.12■□□□□ 0.33
POLR1E-202ENST00000377798 XBP1P17861 261 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 TNNI2P48788 182 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 RBM26Q5T8P6 1007 aaKnown RBP17.12■□□□□ 0.33
POLR1E-202ENST00000377798 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
POLR1E-202ENST00000377798 GPT2Q8TD30 523 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 LZTS2Q9BRK4 669 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 TMEM39BQ9GZU3 492 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 CLIP2Q9UDT6 1046 aa17.12■□□□□ 0.33
POLR1E-202ENST00000377798 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
POLR1E-202ENST00000377798 MMP1P03956 469 aa17.11■□□□□ 0.33
POLR1E-202ENST00000377798 SAMD7Q7Z3H4 446 aa17.11■□□□□ 0.33
POLR1E-202ENST00000377798 GPC2Q8N158 579 aa17.11■□□□□ 0.33
POLR1E-202ENST00000377798 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
POLR1E-202ENST00000377798 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
POLR1E-202ENST00000377798 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
POLR1E-202ENST00000377798 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
POLR1E-202ENST00000377798 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
POLR1E-202ENST00000377798 hCG_1642624A0A1W2PR95 340 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 PDHBP11177 359 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.336e-7■■■□□ 14.8
POLR1E-202ENST00000377798 UBE2HP62256 183 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 TNFAIP1Q13829 316 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 RASGRP2Q7LDG7 609 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 TBC1D12O60347 775 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 GDF11O95390 407 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 SHROOM1Q2M3G4 852 aaPredicted RBP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
POLR1E-202ENST00000377798 NYAP2Q9P242 653 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 KCNJ14Q9UNX9 436 aa17.1■□□□□ 0.33
POLR1E-202ENST00000377798 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 H7C1D1 291 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 SCG2P13521 617 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 SPZ1Q9BXG8 430 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
POLR1E-202ENST00000377798 CYTH3O43739 400 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 SMARCA1P28370 1054 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 ATP2B2Q01814 1243 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 ICA1Q05084 483 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 RASA3Q14644 834 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 SEPT2Q15019 361 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 ASPRV1Q53RT3 343 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 DIS3L2Q8IYB7 885 aaKnown RBP17.08■□□□□ 0.33
POLR1E-202ENST00000377798 MKL1Q969V6 931 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 SHISA4Q96DD7 197 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 USP28Q96RU2 1077 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.33
POLR1E-202ENST00000377798 CABP5Q9NP86 173 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.33
POLR1E-202ENST00000377798 GH2P01242 217 aa17.07■□□□□ 0.32
POLR1E-202ENST00000377798 EEF2P13639 858 aaKnown RBP17.07■□□□□ 0.32
POLR1E-202ENST00000377798 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
POLR1E-202ENST00000377798 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
POLR1E-202ENST00000377798 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
POLR1E-202ENST00000377798 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
POLR1E-202ENST00000377798 RNF181Q9P0P0 153 aa17.07■□□□□ 0.32
POLR1E-202ENST00000377798 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
POLR1E-202ENST00000377798 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
POLR1E-202ENST00000377798 FTOQ9C0B1 505 aaKnown RBP eCLIP17.07■□□□□ 0.32
POLR1E-202ENST00000377798 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
POLR1E-202ENST00000377798 JAG1P78504 1218 aa17.06■□□□□ 0.32
POLR1E-202ENST00000377798 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
POLR1E-202ENST00000377798 GSE1Q14687 1217 aa17.06■□□□□ 0.32
POLR1E-202ENST00000377798 NOSTRINQ8IVI9 506 aa17.06■□□□□ 0.32
POLR1E-202ENST00000377798 PIBF1Q8WXW3 757 aa17.06■□□□□ 0.32
POLR1E-202ENST00000377798 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
POLR1E-202ENST00000377798 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
POLR1E-202ENST00000377798 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 CAVIN1Q6NZI2 390 aaKnown RBP17.05■□□□□ 0.32
POLR1E-202ENST00000377798 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
POLR1E-202ENST00000377798 SIAH1Q8IUQ4 282 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms