RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 UBE2Q1Q7Z7E8 422 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 OSBPL5Q9H0X9 879 aaPredicted RBP11.76□□□□□ -0.53
C9orf85-202ENST00000377027 DNAJC18Q9H819 358 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 TLR7Q9NYK1 1049 aaKnown RBP11.76□□□□□ -0.53
C9orf85-202ENST00000377027 GNRH1P01148 92 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 GGCXP38435 758 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
C9orf85-202ENST00000377027 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 MSS51Q4VC12 460 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 SH3RF3Q8TEJ3 882 aaPredicted RBP11.75□□□□□ -0.53
C9orf85-202ENST00000377027 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
C9orf85-202ENST00000377027 TRIM75PA6NK02 468 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
C9orf85-202ENST00000377027 CYP2E1P05181 493 aaPredicted RBP11.74□□□□□ -0.53
C9orf85-202ENST00000377027 PRMT2P55345 433 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 KIF22Q14807 665 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 TNNI3KQ59H18 835 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 HABP4Q5JVS0 413 aaKnown RBP11.74□□□□□ -0.53
C9orf85-202ENST00000377027 SPTY2D1Q68D10 685 aaPredicted RBP11.74□□□□□ -0.53
C9orf85-202ENST00000377027 GADL1Q6ZQY3 521 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
C9orf85-202ENST00000377027 PARK7Q99497 189 aaKnown RBP11.74□□□□□ -0.53
C9orf85-202ENST00000377027 FPGT-TNNI3KV9GXZ4 949 aa11.74□□□□□ -0.53
C9orf85-202ENST00000377027 RNF223E7ERA6 249 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 COL6A3P12111 3177 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 GRK4P32298 578 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 MTMR2Q13614 643 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 ARHGEF6Q15052 776 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
C9orf85-202ENST00000377027 PRDM9Q9NQV7 894 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 DBNLQ9UJU6 430 aaKnown RBP11.73□□□□□ -0.53
C9orf85-202ENST00000377027 AGTPBP1Q9UPW5 1226 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 SLC45A1Q9Y2W3 748 aa11.73□□□□□ -0.53
C9orf85-202ENST00000377027 LAMA2P24043 3122 aaKnown RBP11.73□□□□□ -0.53
C9orf85-202ENST00000377027 TRIOBPQ9H2D6 2365 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 NAV1Q8NEY1 1877 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
C9orf85-202ENST00000377027 IPO8O15397 1037 aaKnown RBP11.72□□□□□ -0.53
C9orf85-202ENST00000377027 PEX10O60683 326 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 CCL5P13501 91 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
C9orf85-202ENST00000377027 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
C9orf85-202ENST00000377027 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 AATFQ9NY61 560 aaKnown RBP eCLIP11.72□□□□□ -0.53
C9orf85-202ENST00000377027 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
C9orf85-202ENST00000377027 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
C9orf85-202ENST00000377027 FLT1P17948 1338 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 ELNP15502 786 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 CAP2P40123 477 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 ZAP70P43403 619 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 FLT3LGP49771 235 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 FXR1P51114 621 aaKnown RBP eCLIP11.71□□□□□ -0.53
C9orf85-202ENST00000377027 FCGRTP55899 365 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
C9orf85-202ENST00000377027 SPP2Q13103 211 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 QPCTQ16769 361 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.53
C9orf85-202ENST00000377027 TEX11Q8IYF3 940 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.53
C9orf85-202ENST00000377027 RAET1EQ8TD07 263 aa11.71□□□□□ -0.53
C9orf85-202ENST00000377027 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
C9orf85-202ENST00000377027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.53
C9orf85-202ENST00000377027 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.54
C9orf85-202ENST00000377027 H0YGN5 161 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 LILRB3O75022 631 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
C9orf85-202ENST00000377027 UQCRFS1P1P0C7P4 283 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 GJA8P48165 433 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 MMP16P51512 607 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 HMGCS2P54868 508 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 GSTO1P78417 241 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 GORABQ5T7V8 394 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 MAPKAPK5Q8IW41 473 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
C9orf85-202ENST00000377027 CCDC8Q9H0W5 538 aaPredicted RBP11.7□□□□□ -0.54
C9orf85-202ENST00000377027 LRP2BPQ9P2M1 347 aa11.7□□□□□ -0.54
C9orf85-202ENST00000377027 RLFQ13129 1914 aa11.69□□□□□ -0.54
C9orf85-202ENST00000377027 SURF6O75683 361 aaKnown RBP11.69□□□□□ -0.54
C9orf85-202ENST00000377027 LDHCP07864 332 aa11.69□□□□□ -0.54
C9orf85-202ENST00000377027 GJB1P08034 283 aa11.69□□□□□ -0.54
C9orf85-202ENST00000377027 HNRNPUQ00839 825 aaKnown RBP eCLIP11.69□□□□□ -0.54
C9orf85-202ENST00000377027 FAM110CQ1W6H9 321 aa11.69□□□□□ -0.54
C9orf85-202ENST00000377027 TTC39AQ5SRH9 613 aa11.69□□□□□ -0.54
C9orf85-202ENST00000377027 NAA16Q6N069 864 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms