RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 APOA5Q6Q788 366 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 B4E1Z4 1266 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 COPB2P35606 906 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 CACNB3P54284 484 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 BACE1P56817 501 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 RASAL3Q86YV0 1011 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 CDAN1Q8IWY9 1227 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
CSGALNACT2-201ENST00000374466 KDM4AO75164 1064 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PDIA3P30101 505 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 REPS2Q8NFH8 660 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MAD2L2Q9UI95 211 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 FRMPD4Q14CM0 1322 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 IFNAR1P17181 557 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TRAF1Q13077 416 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 WTAPQ15007 396 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TMEM88BA6NKF7 163 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 APLP1P51693 650 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SAGE1Q9NXZ1 904 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PDHBP11177 359 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 ST3GAL1Q11201 340 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TKFCQ3LXA3 575 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 GPAT2Q6NUI2 795 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 FASTKD5Q7L8L6 764 aaKnown RBP13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 DAGLBQ8NCG7 672 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 AK2P54819 239 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MCTP2Q6DN12 878 aa13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
CSGALNACT2-201ENST00000374466 IGHA2P01877 340 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 GTF2A2P52657 109 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TCP10Q12799 353 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 Q6ZUG5 572 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 BRPF3Q9ULD4 1205 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MANSC4A6NHS7 340 aaPredicted RBP13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 ZNF654Q8IZM8 581 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SLC44A5Q8NCS7 719 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MORF4L1Q9UBU8 362 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 YY1P25490 414 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 ICA1Q05084 483 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 UBAC1Q9BSL1 405 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
CSGALNACT2-201ENST00000374466 A0A1W2PRG0 241 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 GH2P01242 217 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 KIF5BP33176 963 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SHCBP1Q8NEM2 672 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 GJA5P36382 358 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CSADQ9Y600 493 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 ERICH2A1L162 156 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 DHX16O60231 1041 aaKnown RBP13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 IFIT1BQ5T764 474 aaKnown RBP13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 TPCN1Q9ULQ1 816 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
CSGALNACT2-201ENST00000374466 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 MAP2K2P36507 400 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 SEPT2Q15019 361 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CATIPQ7Z7H3 387 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CWC22Q9HCG8 908 aaKnown RBP13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PICK1Q9NRD5 415 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 CETPP11597 493 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 HAND2P61296 217 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 COL9A3Q14050 684 aaPredicted RBP13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 FANCBQ8NB91 859 aa13.04□□□□□ -0.32
CSGALNACT2-201ENST00000374466 PNMA1Q8ND90 353 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms