RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 ERVK-24P63145 666 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 IRF5Q13568 498 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 VPS53Q5VIR6 699 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 LBX2Q6XYB7 198 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 LPAR1Q92633 364 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 PAGR1Q9BTK6 254 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 VCPKMTQ9H867 229 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 MKNK2Q9HBH9 465 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 SPDYE16A6NNV3 312 aaPredicted RBP27.04■■□□□ 1.92
COL9A2-201ENST00000372736 PPARAQ07869 468 aa27.04■■□□□ 1.92
COL9A2-201ENST00000372736 NMIQ13287 307 aaPredicted RBP27.04■■□□□ 1.92
COL9A2-201ENST00000372736 SLAIN1Q8ND83 568 aa27.04■■□□□ 1.92
COL9A2-201ENST00000372736 RILPL2Q969X0 211 aa27.04■■□□□ 1.92
COL9A2-201ENST00000372736 RABGAP1Q9Y3P9 1069 aa27.04■■□□□ 1.92
COL9A2-201ENST00000372736 PRDM1O75626 825 aa27.03■■□□□ 1.92
COL9A2-201ENST00000372736 MYCP01106 439 aaPredicted RBP27.03■■□□□ 1.92
COL9A2-201ENST00000372736 PDE4AP27815 886 aa27.03■■□□□ 1.92
COL9A2-201ENST00000372736 Q3C1V9 767 aa27.03■■□□□ 1.92
COL9A2-201ENST00000372736 SPICE1Q8N0Z3 855 aa27.03■■□□□ 1.92
COL9A2-201ENST00000372736 MYH4Q9Y623 1939 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 PLIN4Q96Q06 1357 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 ADCY3O60266 1144 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 MCMDC2Q4G0Z9 681 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 ZNF589Q86UQ0 364 aaPredicted RBP27.02■■□□□ 1.92
COL9A2-201ENST00000372736 TANGO6Q9C0B7 1094 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 PORCNQ9H237 461 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 ZNF287Q9HBT7 754 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 GJD2Q9UKL4 321 aa27.02■■□□□ 1.92
COL9A2-201ENST00000372736 IGKV6D-41A0A0C4DH26 115 aa27.01■■□□□ 1.91
COL9A2-201ENST00000372736 ELNP15502 786 aa27.01■■□□□ 1.91
COL9A2-201ENST00000372736 ATP2B2Q01814 1243 aa27.01■■□□□ 1.91
COL9A2-201ENST00000372736 MTFR1Q15390 333 aa27.01■■□□□ 1.91
COL9A2-201ENST00000372736 PXYLP1Q8TE99 480 aa27.01■■□□□ 1.91
COL9A2-201ENST00000372736 TMEM106CQ9BVX2 250 aa27.01■■□□□ 1.91
COL9A2-201ENST00000372736 WDR46O15213 610 aaKnown RBP27■■□□□ 1.91
COL9A2-201ENST00000372736 SDSP20132 328 aa27■■□□□ 1.91
COL9A2-201ENST00000372736 MAPK4P31152 587 aa27■■□□□ 1.91
COL9A2-201ENST00000372736 BTBD7Q9P203 1132 aa27■■□□□ 1.91
COL9A2-201ENST00000372736 CCDC171Q6TFL3 1326 aa26.99■■□□□ 1.91
COL9A2-201ENST00000372736 MKI67P46013 3256 aaKnown RBP26.99■■□□□ 1.91
COL9A2-201ENST00000372736 PDE4BQ07343 736 aa26.99■■□□□ 1.91
COL9A2-201ENST00000372736 COG2Q14746 738 aa26.99■■□□□ 1.91
COL9A2-201ENST00000372736 ALX1Q15699 326 aa26.99■■□□□ 1.91
COL9A2-201ENST00000372736 NYAP2Q9P242 653 aa26.99■■□□□ 1.91
COL9A2-201ENST00000372736 PDE4DIPQ5VU43 2346 aa26.99■■□□□ 1.91
COL9A2-201ENST00000372736 SLC3A2P08195 630 aaKnown RBP26.98■■□□□ 1.91
COL9A2-201ENST00000372736 EN2P19622 333 aaPredicted RBP26.98■■□□□ 1.91
COL9A2-201ENST00000372736 ZNF444Q8N0Y2 327 aaPredicted RBP26.98■■□□□ 1.91
COL9A2-201ENST00000372736 GOPCQ9HD26 462 aa26.98■■□□□ 1.91
COL9A2-201ENST00000372736 BIN2Q9UBW5 565 aaPredicted RBP26.98■■□□□ 1.91
COL9A2-201ENST00000372736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.98■■□□□ 1.91
COL9A2-201ENST00000372736 ZMYM6O95789 1325 aa26.97■■□□□ 1.91
COL9A2-201ENST00000372736 CTDSPL2Q05D32 466 aa26.97■■□□□ 1.91
COL9A2-201ENST00000372736 GPR142Q7Z601 462 aa26.97■■□□□ 1.91
COL9A2-201ENST00000372736 ANAPC4Q9UJX5 808 aa26.97■■□□□ 1.91
COL9A2-201ENST00000372736 COL11A1P12107 1806 aaPredicted RBP26.96■■□□□ 1.91
COL9A2-201ENST00000372736 FLOT1O75955 427 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 INHAP05111 366 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 HSPD1P10809 573 aaKnown RBP26.96■■□□□ 1.91
COL9A2-201ENST00000372736 CCL5P13501 91 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 UBXN2AP68543 259 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 CCNA1P78396 465 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 SOCS4Q8WXH5 440 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 CEP95Q96GE4 821 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 HOXC10Q9NYD6 342 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 TACC3Q9Y6A5 838 aa26.96■■□□□ 1.91
COL9A2-201ENST00000372736 DSG3P32926 999 aa26.95■■□□□ 1.9
COL9A2-201ENST00000372736 PLEKHH3Q7Z736 793 aa26.95■■□□□ 1.9
COL9A2-201ENST00000372736 NEDD1Q8NHV4 660 aa26.95■■□□□ 1.9
COL9A2-201ENST00000372736 USP6NLQ92738 828 aa26.95■■□□□ 1.9
COL9A2-201ENST00000372736 MTMR4Q9NYA4 1195 aa26.95■■□□□ 1.9
COL9A2-201ENST00000372736 FGAP02671 866 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 TSPY3P0CV98 308 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 TSPY8P0CW00 308 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 GSPT1P15170 499 aaKnown RBP26.94■■□□□ 1.9
COL9A2-201ENST00000372736 FAM47AQ5JRC9 791 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 MORN1Q5T089 497 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 TTC22Q5TAA0 569 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 CCAR1Q8IX12 1150 aaKnown RBP26.94■■□□□ 1.9
COL9A2-201ENST00000372736 ATG4CQ96DT6 458 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 NUDT12Q9BQG2 462 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 INCENPQ9NQS7 918 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 LAMA4Q16363 1823 aa26.94■■□□□ 1.9
COL9A2-201ENST00000372736 TFAP4Q01664 338 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 FAM83BQ5T0W9 1011 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 MB21D1Q8N884 522 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 SHISA4Q96DD7 197 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 UNC93B1Q9H1C4 597 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 DIAPH3Q9NSV4 1193 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 FBXO28Q9NVF7 368 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 CLIP2Q9UDT6 1046 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 ZNF236Q9UL36 1845 aa26.93■■□□□ 1.9
COL9A2-201ENST00000372736 RAD21O60216 631 aa26.92■■□□□ 1.9
COL9A2-201ENST00000372736 NDUFB10O96000 172 aa26.92■■□□□ 1.9
COL9A2-201ENST00000372736 HMGCRP04035 888 aa26.92■■□□□ 1.9
COL9A2-201ENST00000372736 CYP2B6P20813 491 aa26.92■■□□□ 1.9
COL9A2-201ENST00000372736 CWC27Q6UX04 472 aaKnown RBP26.92■■□□□ 1.9
COL9A2-201ENST00000372736 MKL1Q969V6 931 aa26.92■■□□□ 1.9
COL9A2-201ENST00000372736 RNF208Q9H0X6 261 aa26.92■■□□□ 1.9
COL9A2-201ENST00000372736 SYNPO2Q9UMS6 1093 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms