RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 GNAT1P11488 350 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 RPS6KB1P23443 525 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 GJA8P48165 433 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 IRAK1P51617 712 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 PHEXP78562 749 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 DDR1Q08345 913 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 MRPL50Q8N5N7 158 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 IL17RAQ96F46 866 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 BICD1Q96G01 975 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 NDUFA13Q9P0J0 144 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 RTEL1-TNFRSF6BF6WH68 1400 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ZNF189O75820 626 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 HARSP12081 509 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 METAP2P50579 478 aaKnown RBP eCLIP5.54□□□□□ -1.52
SKP1-202ENST00000353411 CETN1Q12798 172 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 C6orf118Q5T5N4 469 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 TRMT2AQ8IZ69 625 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 DDX54Q8TDD1 881 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 LRRC8CQ8TDW0 803 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 TCP11L1Q9NUJ3 509 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 NSFL1CQ9UNZ2 370 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 KAT6AQ92794 2004 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ATXN2Q99700 1313 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 DIAPH2O60879 1101 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 PPP1R37O75864 691 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ANO1Q5XXA6 986 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 TMTC2Q8N394 836 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 TBC1D5Q92609 795 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 UNC45AQ9H3U1 944 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 SNX14Q9Y5W7 946 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 EPN1Q9Y6I3 576 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 HNRNPCL1O60812 293 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 ALDH1L1O75891 902 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 KPNB1Q14974 876 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 MFSD4BQ5TF39 518 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 C16orf87Q6PH81 154 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 SPATA21Q7Z572 469 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 TTC6Q86TZ1 520 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 KAT14Q9H8E8 782 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 XAB2Q9HCS7 855 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 COL17A1Q9UMD9 1497 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 A0A087WZG4 1122 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 STK25O00506 426 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 AP1G2O75843 785 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 CYP2E1P05181 493 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 AFMP43652 599 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 IL9RQ01113 521 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 FAM43BQ6ZT52 329 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 CASP10Q92851 521 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 IWS1Q96ST2 819 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ABCF2Q9UG63 623 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 TCEAL9Q9UHQ7 104 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 MCF2LO15068 1137 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 PPP4R3AQ6IN85 833 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 CCDC25Q86WR0 208 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 C16orf71Q8IYS4 520 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 ALG1Q9BT22 464 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 FRMD4BQ9Y2L6 1034 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ARAP3Q8WWN8 1544 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 hCG_2014768A0A024R1R8 64 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 I3L4J1 428 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ESRRBO95718 433 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 BAG2O95816 211 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 STAT6P42226 847 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 NMIQ13287 307 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 POSTNQ15063 836 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 RPS6KA1Q15418 735 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 BICDL1Q6ZP65 573 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 FAM186BQ8IYM0 893 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 CFAP61Q8NHU2 1237 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 CCT8L2Q96SF2 557 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 NOD2Q9HC29 1040 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 FGFR1OP2Q9NVK5 253 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 IL1RAPL1Q9NZN1 696 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 IQSEC3Q9UPP2 1182 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 MYO1FO00160 1098 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 LIN7AO14910 233 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 FSBPO95073 299 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 FAM107AO95990 144 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 GUCY2DQ02846 1103 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 CCDC84Q86UT8 332 aaPredicted RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 MSL3Q8N5Y2 521 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 PRPF38AQ8NAV1 312 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 NCOA7Q8NI08 942 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ZNF473Q8WTR7 871 aaKnown RBP5.54□□□□□ -1.52
SKP1-202ENST00000353411 FUT8Q9BYC5 575 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 ANKRD2Q9GZV1 360 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 HAUS2Q9NVX0 235 aa5.54□□□□□ -1.52
SKP1-202ENST00000353411 CHD1O14646 1710 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ZNF213O14771 459 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 VCAM1P19320 739 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 ITIH3Q06033 890 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 FLIIQ13045 1269 aa5.53□□□□□ -1.52
SKP1-202ENST00000353411 SOGA3Q5TF21 947 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms