RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ROBO2Q9HCK4 1378 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 EXOC3O60645 756 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 NBPF14Q5TI25 921 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 SFMBT2Q5VUG0 894 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 PDE8BO95263 885 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 USP6P35125 1406 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 SAMD15Q9P1V8 674 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 UTP11Q9Y3A2 253 aaKnown RBP17.8■□□□□ 0.44
PTPN11-201ENST00000351677 H0YIN7 160 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 LRRC8AQ8IWT6 810 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 IFT20Q8IY31 132 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 IFT74Q96LB3 600 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 MAK16Q9BXY0 300 aaKnown RBP17.79■□□□□ 0.44
PTPN11-201ENST00000351677 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
PTPN11-201ENST00000351677 TBC1D22AQ8WUA7 517 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 MRRFQ96E11 262 aaKnown RBP17.79■□□□□ 0.44
PTPN11-201ENST00000351677 CTTNBP2NLQ9P2B4 639 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 ARHGEF25Q86VW2 580 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 FBXO18Q8NFZ0 1043 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 IFIH1Q9BYX4 1025 aaKnown RBP17.79■□□□□ 0.44
PTPN11-201ENST00000351677 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 CEP57Q86XR8 500 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 ERBB4Q15303 1308 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 KIF1BO60333 1816 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 SCG2P13521 617 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 TPH2Q8IWU9 490 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 LRRC47Q8N1G4 583 aaKnown RBP17.79■□□□□ 0.44
PTPN11-201ENST00000351677 RDH13Q8NBN7 331 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 GDAP1L1Q96MZ0 367 aa17.79■□□□□ 0.44
PTPN11-201ENST00000351677 STX10O60499 249 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 UAP1Q16222 522 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-201ENST00000351677 CFAP74Q9C0B2 1584 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 GOLGA6CA6NDK9 693 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 GOLGA6DP0CG33 693 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 CCDC84Q86UT8 332 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-201ENST00000351677 KIFC2Q96AC6 838 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 GOLGA6AQ9NYA3 693 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 ZNF500O60304 480 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-201ENST00000351677 VIMP08670 466 aaKnown RBP17.78■□□□□ 0.44
PTPN11-201ENST00000351677 STRN3Q13033 797 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 NSMFQ6X4W1 530 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 ARL1P40616 181 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-201ENST00000351677 UBL4BQ8N7F7 174 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 EXOC7Q9UPT5 735 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 ATP2A2P16615 1042 aaKnown RBP17.78■□□□□ 0.44
PTPN11-201ENST00000351677 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
PTPN11-201ENST00000351677 KLRF2D3W0D1 207 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 COBLO75128 1261 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 TMOD4Q9NZQ9 345 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 PCDHB13Q9Y5F0 798 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 A0A087WWV3 80 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 ARHGAP44Q17R89 818 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 DAAM2Q86T65 1068 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 SYMPKQ92797 1274 aaKnown RBP17.77■□□□□ 0.44
PTPN11-201ENST00000351677 LSM14BQ9BX40 385 aaKnown RBP17.77■□□□□ 0.44
PTPN11-201ENST00000351677 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTPN11-201ENST00000351677 NRBP1Q9UHY1 535 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 NSUN7Q8NE18 718 aaKnown RBP17.77■□□□□ 0.44
PTPN11-201ENST00000351677 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
PTPN11-201ENST00000351677 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.43
PTPN11-201ENST00000351677 ACTN4O43707 911 aaKnown RBP17.77■□□□□ 0.43
PTPN11-201ENST00000351677 CIAO1O76071 339 aa17.77■□□□□ 0.43
PTPN11-201ENST00000351677 CA8P35219 290 aa17.77■□□□□ 0.43
PTPN11-201ENST00000351677 PTGDRQ13258 359 aa17.77■□□□□ 0.43
PTPN11-201ENST00000351677 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.43
PTPN11-201ENST00000351677 STK24Q9Y6E0 443 aa17.77■□□□□ 0.43
PTPN11-201ENST00000351677 CARMIL3Q8ND23 1372 aa17.77■□□□□ 0.43
PTPN11-201ENST00000351677 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
PTPN11-201ENST00000351677 GPBP1Q86WP2 473 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 PODXL2Q9NZ53 605 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 TXNDC16Q9P2K2 825 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 GTF2A1P52655 376 aaPredicted RBP17.76■□□□□ 0.43
PTPN11-201ENST00000351677 PI16Q6UXB8 463 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 OR8K1Q8NGG5 319 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 LRRC45Q96CN5 670 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 PPP2R2CQ9Y2T4 447 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 GOLGA6BA6NDN3 693 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 OAS2P29728 719 aaKnown RBP17.76■□□□□ 0.43
PTPN11-201ENST00000351677 SCNN1DP51172 638 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 PRKG1Q13976 671 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 LARGE1O95461 756 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 RPS6KA1Q15418 735 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 ERCC6LQ2NKX8 1250 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 TTC31Q49AM3 519 aaPredicted RBP17.76■□□□□ 0.43
PTPN11-201ENST00000351677 USP21Q9UK80 565 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 FLOT1O75955 427 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 TRPC3Q13507 836 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 SND1Q7KZF4 910 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTPN11-201ENST00000351677 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
PTPN11-201ENST00000351677 ERCC5P28715 1186 aaPredicted RBP17.75■□□□□ 0.43
PTPN11-201ENST00000351677 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 USTQ9Y2C2 406 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 CFAP221Q4G0U5 840 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 MRFAP1L1Q96HT8 127 aa17.75■□□□□ 0.43
PTPN11-201ENST00000351677 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms