RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 USP17L3A6NCW0 530 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 USP17L4A6NCW7 530 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 NPY5RQ15761 445 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 USP17L1Q7RTZ2 530 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 CDK5RAP2Q96SN8 1893 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 IKBKBO14920 756 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 ATP2B1P20020 1258 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 LONRF3Q496Y0 759 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 STX8Q9UNK0 236 aa26.16■■□□□ 1.78
CNTFR-201ENST00000351266 GALNT17Q6IS24 598 aa26.15■■□□□ 1.78
CNTFR-201ENST00000351266 SLC44A5Q8NCS7 719 aa26.15■■□□□ 1.78
CNTFR-201ENST00000351266 TMEM47Q9BQJ4 181 aa26.15■■□□□ 1.78
CNTFR-201ENST00000351266 MAD2L2Q9UI95 211 aa26.15■■□□□ 1.78
CNTFR-201ENST00000351266 TTC38Q5R3I4 469 aa26.14■■□□□ 1.78
CNTFR-201ENST00000351266 CCDC148Q8NFR7 591 aa26.14■■□□□ 1.78
CNTFR-201ENST00000351266 QSER1Q2KHR3 1735 aa26.14■■□□□ 1.77
CNTFR-201ENST00000351266 G3V3G9 751 aa26.14■■□□□ 1.77
CNTFR-201ENST00000351266 BIN1O00499 593 aa26.14■■□□□ 1.77
CNTFR-201ENST00000351266 DCAF8Q5TAQ9 597 aa26.14■■□□□ 1.77
CNTFR-201ENST00000351266 METTL16Q86W50 562 aaKnown RBP26.14■■□□□ 1.77
CNTFR-201ENST00000351266 SNED1Q8TER0 1413 aa26.13■■□□□ 1.77
CNTFR-201ENST00000351266 TERF1P54274 439 aa26.13■■□□□ 1.77
CNTFR-201ENST00000351266 OLFM4Q6UX06 510 aa26.13■■□□□ 1.77
CNTFR-201ENST00000351266 FBXW7Q969H0 707 aa26.13■■□□□ 1.77
CNTFR-201ENST00000351266 A0A087WWV3 80 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 PALM3A6NDB9 673 aaPredicted RBP26.12■■□□□ 1.77
CNTFR-201ENST00000351266 PNOCQ13519 176 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 EARS2Q5JPH6 523 aaKnown RBP26.12■■□□□ 1.77
CNTFR-201ENST00000351266 CCDC186Q7Z3E2 898 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 CSRNP2Q9H175 543 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 POLR2DO15514 142 aaKnown RBP26.12■■□□□ 1.77
CNTFR-201ENST00000351266 TOP1P11387 765 aaKnown RBP26.12■■□□□ 1.77
CNTFR-201ENST00000351266 SMARCA1P28370 1054 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 RXRBP28702 533 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 NOLC1Q14978 699 aaKnown RBP eCLIP26.12■■□□□ 1.77
CNTFR-201ENST00000351266 BLIDQ8IZY5 108 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 KCNF1Q9H3M0 494 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 PCDHA4Q9UN74 947 aa26.12■■□□□ 1.77
CNTFR-201ENST00000351266 RGPD3A6NKT7 1758 aaPredicted RBP26.11■■□□□ 1.77
CNTFR-201ENST00000351266 RGPD4Q7Z3J3 1758 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 FOCADQ5VW36 1801 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 FAM205CA6NFA0 338 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 MYO1BO43795 1136 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 MDM2Q00987 491 aaPredicted RBP26.11■■□□□ 1.77
CNTFR-201ENST00000351266 GRIN1Q05586 938 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 POSTNQ15063 836 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 SPECC1Q5M775 1068 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 STAG2Q8N3U4 1231 aa26.11■■□□□ 1.77
CNTFR-201ENST00000351266 TTF2Q9UNY4 1162 aaKnown RBP26.11■■□□□ 1.77
CNTFR-201ENST00000351266 NEMFO60524 1076 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 PTGS1P23219 599 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 NOVP48745 357 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 ATP2C1P98194 919 aaPredicted RBP26.1■■□□□ 1.77
CNTFR-201ENST00000351266 STYK1Q6J9G0 422 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 HHIPL2Q6UWX4 724 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 PODNQ7Z5L7 613 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 TRIML1Q8N9V2 468 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 DAGLBQ8NCG7 672 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 KIAA1524Q8TCG1 905 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 PYM1Q9BRP8 204 aaKnown RBP26.1■■□□□ 1.77
CNTFR-201ENST00000351266 SPZ1Q9BXG8 430 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 SPTLC3Q9NUV7 552 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 PLIN4Q96Q06 1357 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 MYH1P12882 1939 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 DACH1Q9UI36 760 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 PCDHA5Q9Y5H7 936 aa26.1■■□□□ 1.77
CNTFR-201ENST00000351266 PARP1P09874 1014 aaKnown RBP26.09■■□□□ 1.77
CNTFR-201ENST00000351266 NT5DC1Q5TFE4 455 aa26.09■■□□□ 1.77
CNTFR-201ENST00000351266 PIK3AP1Q6ZUJ8 805 aa26.09■■□□□ 1.77
CNTFR-201ENST00000351266 CCDC12Q8WUD4 166 aaPredicted RBP26.09■■□□□ 1.77
CNTFR-201ENST00000351266 SWAP70Q9UH65 585 aa26.09■■□□□ 1.77
CNTFR-201ENST00000351266 COL11A2P13942 1736 aaPredicted RBP26.09■■□□□ 1.77
CNTFR-201ENST00000351266 MYO3BQ8WXR4 1341 aa26.09■■□□□ 1.77
CNTFR-201ENST00000351266 DHX8Q14562 1220 aaKnown RBP26.08■■□□□ 1.77
CNTFR-201ENST00000351266 CERS5Q8N5B7 392 aa26.08■■□□□ 1.77
CNTFR-201ENST00000351266 SERTAD1Q9UHV2 236 aa26.08■■□□□ 1.77
CNTFR-201ENST00000351266 H0YIN7 160 aa26.08■■□□□ 1.76
CNTFR-201ENST00000351266 ZNF174Q15697 407 aa26.08■■□□□ 1.76
CNTFR-201ENST00000351266 SMARCE1Q969G3 411 aa26.08■■□□□ 1.76
CNTFR-201ENST00000351266 ZNF622Q969S3 477 aaKnown RBP eCLIP26.08■■□□□ 1.76
CNTFR-201ENST00000351266 TEKT1Q969V4 418 aa26.08■■□□□ 1.76
CNTFR-201ENST00000351266 BARHL2Q9NY43 387 aa26.08■■□□□ 1.76
CNTFR-201ENST00000351266 KLRF2D3W0D1 207 aa26.07■■□□□ 1.76
CNTFR-201ENST00000351266 FKBP1AP62942 108 aaKnown RBP26.07■■□□□ 1.76
CNTFR-201ENST00000351266 MYL5Q02045 173 aa26.07■■□□□ 1.76
CNTFR-201ENST00000351266 DOK7Q18PE1 504 aa26.07■■□□□ 1.76
CNTFR-201ENST00000351266 ARL6IP4Q66PJ3 421 aaKnown RBP26.07■■□□□ 1.76
CNTFR-201ENST00000351266 C2CD5Q86YS7 1000 aa26.07■■□□□ 1.76
CNTFR-201ENST00000351266 ACTN4O43707 911 aaKnown RBP26.06■■□□□ 1.76
CNTFR-201ENST00000351266 SMC2O95347 1197 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 GABPAQ06546 454 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 PTGDRQ13258 359 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 NCAPHQ15003 741 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 MRIQ9BWK5 157 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 USP40Q9NVE5 1235 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 F8W031 263 aaPredicted RBP26.06■■□□□ 1.76
CNTFR-201ENST00000351266 MLKLQ8NB16 471 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 CEP95Q96GE4 821 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 IMPACTQ9P2X3 320 aa26.06■■□□□ 1.76
CNTFR-201ENST00000351266 CCDC194A0A1B0GVG4 234 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms