RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 MTRF1LQ9UGC7 380 aaKnown RBP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 PTGDRQ13258 359 aa16.52■□□□□ 0.24
RRP1B-201ENST00000340648 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
RRP1B-201ENST00000340648 OSBPL5Q9H0X9 879 aaPredicted RBP16.52■□□□□ 0.24
RRP1B-201ENST00000340648 PPANQ9NQ55 473 aaKnown RBP16.52■□□□□ 0.24
RRP1B-201ENST00000340648 NR5A1Q13285 461 aa16.52■□□□□ 0.24
RRP1B-201ENST00000340648 TOGARAM2Q6ZUX3 1019 aa16.52■□□□□ 0.24
RRP1B-201ENST00000340648 LRRC45Q96CN5 670 aa16.52■□□□□ 0.24
RRP1B-201ENST00000340648 PUS7LQ9H0K6 701 aaKnown RBP16.52■□□□□ 0.24
RRP1B-201ENST00000340648 E9PCH4 1651 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 ST7Q9NRC1 585 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 TBC1D7Q9P0N9 293 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 ATP10DQ9P241 1426 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 RNF17Q9BXT8 1623 aaKnown RBP16.52■□□□□ 0.23
RRP1B-201ENST00000340648 DNM2P50570 870 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 ENOX1Q8TC92 643 aaKnown RBP16.52■□□□□ 0.23
RRP1B-201ENST00000340648 ZCCHC17Q9NP64 241 aaKnown RBP16.52■□□□□ 0.23
RRP1B-201ENST00000340648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.52■□□□□ 0.23
RRP1B-201ENST00000340648 TMOD2Q9NZR1 351 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.23
RRP1B-201ENST00000340648 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 RPN1P04843 607 aaKnown RBP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 FBF1Q8TES7 1133 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 ANKRD7Q92527 254 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 ABCB6Q9NP58 842 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 H7C1D1 291 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 BUB1O43683 1085 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 LDHBP07195 334 aaKnown RBP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 ZSCAN20P17040 1043 aaPredicted RBP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 ARID4AP29374 1257 aaPredicted RBP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 CCDC6Q16204 474 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 GPR108Q9NPR9 543 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 HYOU1Q9Y4L1 999 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 GJC1P36383 396 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 NONOQ15233 471 aaKnown RBP eCLIP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
RRP1B-201ENST00000340648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
RRP1B-201ENST00000340648 CC2D1AQ6P1N0 951 aaPredicted RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 SNX29Q8TEQ0 813 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 GSDMAQ96QA5 445 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 ZCCHC11Q5TAX3 1644 aaKnown RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 RSRC1Q96IZ7 334 aaKnown RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 ZSCAN10Q96SZ4 725 aaPredicted RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 CCDC77Q9BR77 488 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 GOLGA8KD6RF30 607 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 FAM13AO94988 1023 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 PHKA1P46020 1223 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 VWA3BQ502W6 1294 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 FMNL1O95466 1100 aaPredicted RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 RPS6KA1Q15418 735 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 PPP1R7Q15435 360 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 CEP85LQ5SZL2 805 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 SFMBT2Q5VUG0 894 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 KCTD16Q68DU8 428 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 NCAPH2Q6IBW4 605 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 ARMCX5Q6P1M9 558 aa16.5■□□□□ 0.23
RRP1B-201ENST00000340648 FOXP1Q9H334 677 aaPredicted RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 UTP11Q9Y3A2 253 aaKnown RBP16.5■□□□□ 0.23
RRP1B-201ENST00000340648 CTSWP56202 376 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 RAD51AP2Q09MP3 1159 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 CASP8Q14790 479 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 NEO1Q92859 1461 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 FAM170AA1A519 330 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 HS2ST1Q7LGA3 356 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 ADAM21Q9UKJ8 722 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 HGSO14964 777 aaPredicted RBP16.49■□□□□ 0.23
RRP1B-201ENST00000340648 CALCOCO2Q13137 446 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 PLS1Q14651 629 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 PTPROQ16827 1216 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 REREQ9P2R6 1566 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
RRP1B-201ENST00000340648 GPCPD1Q9NPB8 672 aa16.49■□□□□ 0.23
RRP1B-201ENST00000340648 B4DLN1 442 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 SH2B2O14492 632 aaPredicted RBP16.48■□□□□ 0.23
RRP1B-201ENST00000340648 UBE3CQ15386 1083 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 DAAM2Q86T65 1068 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 USP17L21D6R901 530 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 MAP2K2P36507 400 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 KRT71Q3SY84 523 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 PNMA8AQ86V59 439 aaPredicted RBP16.48■□□□□ 0.23
RRP1B-201ENST00000340648 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
RRP1B-201ENST00000340648 ANKRD65E5RJM6 399 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms