RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 CNNM2Q9H8M5 875 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 IL17RBQ9NRM6 502 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 SYNPO2Q9UMS6 1093 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 TLR2O60603 784 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 CYP2C8P10632 490 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 HOXA7P31268 230 aaPredicted RBP15.17■□□□□ 0.02
SRSF3-201ENST00000339436 NOVP48745 357 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 KIAA1755Q5JYT7 1200 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 PPP4R3BQ5MIZ7 849 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 KRT23Q9C075 422 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 GPR25O00155 361 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 SLC27A2O14975 620 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 KDM4AO75164 1064 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 REC8O95072 547 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 STOX1Q6ZVD7 989 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
SRSF3-201ENST00000339436 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
SRSF3-201ENST00000339436 MKL1Q969V6 931 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
SRSF3-201ENST00000339436 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
SRSF3-201ENST00000339436 E7EWF7 191 aa15.16■□□□□ 0.02
SRSF3-201ENST00000339436 WDR46O15213 610 aaKnown RBP15.16■□□□□ 0.02
SRSF3-201ENST00000339436 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
SRSF3-201ENST00000339436 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
SRSF3-201ENST00000339436 SPICE1Q8N0Z3 855 aa15.16■□□□□ 0.02
SRSF3-201ENST00000339436 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
SRSF3-201ENST00000339436 PRDM10Q9NQV6 1147 aa15.16■□□□□ 0.02
SRSF3-201ENST00000339436 MYH6P13533 1939 aa15.16■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L15C9J2P7 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L13C9JLJ4 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L11C9JVI0 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L18D6R9N7 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L22D6RA61 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L17D6RBQ6 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L19D6RCP7 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L20D6RJB6 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 NDUFB10O96000 172 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 OSBPP22059 807 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 USP17L24Q0WX57 530 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 TRDNQ13061 729 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 IQCA1Q86XH1 822 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 GMCL1P1Q8NEA9 526 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 ZNF296Q8WUU4 475 aaPredicted RBP15.15■□□□□ 0.02
SRSF3-201ENST00000339436 ZSWIM5Q9P217 1185 aa15.15■□□□□ 0.02
SRSF3-201ENST00000339436 BCRP11274 1271 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 RNF20Q5VTR2 975 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 RCSD1Q6JBY9 416 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 C17orf99Q6UX52 265 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 CATSPERGQ6ZRH7 1159 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 RALYLQ86SE5 291 aaKnown RBP15.14■□□□□ 0.01
SRSF3-201ENST00000339436 NCOA7Q8NI08 942 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
SRSF3-201ENST00000339436 TNKSO95271 1327 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 F5H6K3 240 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 EPB41L2O43491 1005 aaKnown RBP15.13■□□□□ 0.01
SRSF3-201ENST00000339436 RAD21O60216 631 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 GCLCP48506 637 aaPredicted RBP15.13■□□□□ 0.01
SRSF3-201ENST00000339436 HERVK_113P62684 666 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 KLRC3Q07444 240 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 ZKSCAN3Q9BRR0 538 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 PLXNB2O15031 1838 aa15.13■□□□□ 0.01
SRSF3-201ENST00000339436 FKTNO75072 461 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 CCDC178Q5BJE1 867 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 CYB5R4Q7L1T6 521 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 ENAHQ8N8S7 591 aaPredicted RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 TTC14Q96N46 770 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 ZSCAN10Q96SZ4 725 aaPredicted RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 P2RX7Q99572 595 aaKnown RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 MYPNQ86TC9 1320 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 SPDYE16A6NNV3 312 aaPredicted RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 HSPA4P34932 840 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 SP3Q02447 781 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 FAM110CQ1W6H9 321 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 LBX2Q6XYB7 198 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 DGKHQ86XP1 1220 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 GTF3C2Q8WUA4 911 aaPredicted RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 GMCL1Q96IK5 515 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
SRSF3-201ENST00000339436 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
SRSF3-201ENST00000339436 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 FLOT1O75955 427 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
SRSF3-201ENST00000339436 TSGA10IPQ3SY00 556 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 RASGRP2Q7LDG7 609 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 ANKS1AQ92625 1134 aa15.11■□□□□ 0.01
SRSF3-201ENST00000339436 KCNB2Q92953 911 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms