RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 PRDM1O75626 825 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 EEF2P13639 858 aaKnown RBP18.2■□□□□ 0.5
PRKN-201ENST00000338468 PRKCZQ05513 592 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 ALX1Q15699 326 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
PRKN-201ENST00000338468 KANSL2Q9H9L4 492 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 MKNK2Q9HBH9 465 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 GABRQQ9UN88 632 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
PRKN-201ENST00000338468 ARHGEF10LQ9HCE6 1279 aa18.19■□□□□ 0.5
PRKN-201ENST00000338468 RLFQ13129 1914 aa18.19■□□□□ 0.5
PRKN-201ENST00000338468 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
PRKN-201ENST00000338468 MYPNQ86TC9 1320 aa18.19■□□□□ 0.5
PRKN-201ENST00000338468 RANBP2P49792 3224 aaKnown RBP18.18■□□□□ 0.5
PRKN-201ENST00000338468 CNMDO75829 334 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 FGAP02671 866 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
PRKN-201ENST00000338468 HOXD10P28358 340 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 Q3C1V9 767 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 NKX2-3Q8TAU0 364 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 DPF3Q92784 378 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 VCPKMTQ9H867 229 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 INCENPQ9NQS7 918 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 ANAPC4Q9UJX5 808 aa18.18■□□□□ 0.5
PRKN-201ENST00000338468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.54e-10■■■■□ 21.6
PRKN-201ENST00000338468 DOCK3Q8IZD9 2030 aa18.17■□□□□ 0.5
PRKN-201ENST00000338468 CTDSPL2Q05D32 466 aa18.17■□□□□ 0.5
PRKN-201ENST00000338468 LBX2Q6XYB7 198 aa18.17■□□□□ 0.5
PRKN-201ENST00000338468 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
PRKN-201ENST00000338468 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
PRKN-201ENST00000338468 TNPO2O14787 897 aaKnown RBP18.16■□□□□ 0.5
PRKN-201ENST00000338468 FLT3LGP49771 235 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 ERVK-9P63128 1117 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 ERVK-24P63145 666 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 ATP2B2Q01814 1243 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 MTFR1Q15390 333 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
PRKN-201ENST00000338468 ZNF444Q8N0Y2 327 aaPredicted RBP18.16■□□□□ 0.5
PRKN-201ENST00000338468 SPICE1Q8N0Z3 855 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 GPRC5AQ8NFJ5 357 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 RAET1EQ8TD07 263 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 LPAR1Q92633 364 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 IL25Q9H293 177 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 NYAP2Q9P242 653 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 ZMYM6O95789 1325 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
PRKN-201ENST00000338468 FGRP09769 529 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 PDE4BQ07343 736 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 FAM47AQ5JRC9 791 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 GTF3C2Q8WUA4 911 aaPredicted RBP18.15■□□□□ 0.5
PRKN-201ENST00000338468 CEP95Q96GE4 821 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 HTATIP2Q9BUP3 242 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 PORCNQ9H237 461 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 DIAPH3Q9NSV4 1193 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 BTBD7Q9P203 1132 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 RBM27Q9P2N5 1060 aaKnown RBP18.15■□□□□ 0.5
PRKN-201ENST00000338468 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 RABGAP1Q9Y3P9 1069 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
PRKN-201ENST00000338468 PARP14Q460N5 1801 aa18.14■□□□□ 0.5
PRKN-201ENST00000338468 SLC3A2P08195 630 aaKnown RBP18.14■□□□□ 0.49
PRKN-201ENST00000338468 GRK4P32298 578 aa18.14■□□□□ 0.49
PRKN-201ENST00000338468 NEDD1Q8NHV4 660 aa18.14■□□□□ 0.49
PRKN-201ENST00000338468 TANGO6Q9C0B7 1094 aa18.14■□□□□ 0.49
PRKN-201ENST00000338468 NBPF3Q9H094 633 aa18.14■□□□□ 0.49
PRKN-201ENST00000338468 MTMR4Q9NYA4 1195 aa18.14■□□□□ 0.49
PRKN-201ENST00000338468 HIP1O00291 1037 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 WDR46O15213 610 aaKnown RBP18.13■□□□□ 0.49
PRKN-201ENST00000338468 TFAP4Q01664 338 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 IRF5Q13568 498 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 COG2Q14746 738 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 MKL1Q969V6 931 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 COA7Q96BR5 231 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 BIN2Q9UBW5 565 aaPredicted RBP18.13■□□□□ 0.49
PRKN-201ENST00000338468 CLIP2Q9UDT6 1046 aa18.13■□□□□ 0.49
PRKN-201ENST00000338468 ORC4O43929 436 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 GJB1P08034 283 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 TSPY3P0CV98 308 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 TSPY8P0CW00 308 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 CCL5P13501 91 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 DSG3P32926 999 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 GJA8P48165 433 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 UBXN2AP68543 259 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 SKAP1Q86WV1 359 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 IL17RBQ9NRM6 502 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 HOXC10Q9NYD6 342 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 NR2E3Q9Y5X4 410 aa18.12■□□□□ 0.49
PRKN-201ENST00000338468 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
PRKN-201ENST00000338468 F5H6K3 240 aa18.11■□□□□ 0.49
PRKN-201ENST00000338468 ADCY3O60266 1144 aa18.11■□□□□ 0.49
PRKN-201ENST00000338468 FLOT1O75955 427 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms