RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.9■■■□□ 2.86
ATPAF1-201ENST00000329231 FOXP2O15409 715 aa32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 PEX10O60683 326 aa32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 NMIQ13287 307 aaPredicted RBP32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 CCAR1Q8IX12 1150 aaKnown RBP32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 TANGO6Q9C0B7 1094 aa32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 HOXC10Q9NYD6 342 aa32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 BIN2Q9UBW5 565 aaPredicted RBP32.89■■■□□ 2.86
ATPAF1-201ENST00000329231 ADCY3O60266 1144 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 PRDM1O75626 825 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 SDSP20132 328 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 MAPK4P31152 587 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 COG2Q14746 738 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 Q3C1V9 767 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 KIAA1755Q5JYT7 1200 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 VPS53Q5VIR6 699 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 POTEEQ6S8J3 1075 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 GOPCQ9HD26 462 aa32.88■■■□□ 2.85
ATPAF1-201ENST00000329231 POTEFA5A3E0 1075 aa32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 SPDYE16A6NNV3 312 aaPredicted RBP32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 MYCP01106 439 aaPredicted RBP32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 CCNA1P78396 465 aa32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 ALX1Q15699 326 aa32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 SPICE1Q8N0Z3 855 aa32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 PXYLP1Q8TE99 480 aa32.87■■■□□ 2.85
ATPAF1-201ENST00000329231 WDR46O15213 610 aaKnown RBP32.86■■■□□ 2.85
ATPAF1-201ENST00000329231 UBXN2AP68543 259 aa32.86■■■□□ 2.85
ATPAF1-201ENST00000329231 NYAP2Q9P242 653 aa32.86■■■□□ 2.85
ATPAF1-201ENST00000329231 MFAP1P55081 439 aaKnown RBP32.85■■■□□ 2.85
ATPAF1-201ENST00000329231 GJD2Q9UKL4 321 aa32.85■■■□□ 2.85
ATPAF1-201ENST00000329231 CENPFP49454 3210 aa32.85■■■□□ 2.85
ATPAF1-201ENST00000329231 HIP1O00291 1037 aa32.84■■■□□ 2.85
ATPAF1-201ENST00000329231 CNMDO75829 334 aa32.84■■■□□ 2.85
ATPAF1-201ENST00000329231 PDE4AP27815 886 aa32.84■■■□□ 2.85
ATPAF1-201ENST00000329231 CCDC171Q6TFL3 1326 aa32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 TSPY3P0CV98 308 aa32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 TSPY8P0CW00 308 aa32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 ZNF589Q86UQ0 364 aaPredicted RBP32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 PORCNQ9H237 461 aa32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 CWC22Q9HCG8 908 aaKnown RBP32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 DIAPH3Q9NSV4 1193 aa32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 GREB1LQ9C091 1923 aaPredicted RBP32.83■■■□□ 2.85
ATPAF1-201ENST00000329231 IGKV6D-41A0A0C4DH26 115 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 RAD21O60216 631 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 FLOT1O75955 427 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 HSPD1P10809 573 aaKnown RBP32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 ELNP15502 786 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 SOCS4Q8WXH5 440 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 NUDT12Q9BQG2 462 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 BTBD7Q9P203 1132 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 ANAPC4Q9UJX5 808 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 KIAA0100Q14667 2235 aaKnown RBP32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 DOCK3Q8IZD9 2030 aa32.82■■■□□ 2.84
ATPAF1-201ENST00000329231 CTDSPL2Q05D32 466 aa32.81■■■□□ 2.84
ATPAF1-201ENST00000329231 MTFR1Q15390 333 aa32.81■■■□□ 2.84
ATPAF1-201ENST00000329231 MB21D1Q8N884 522 aa32.81■■■□□ 2.84
ATPAF1-201ENST00000329231 NEDD1Q8NHV4 660 aa32.81■■■□□ 2.84
ATPAF1-201ENST00000329231 FGAP02671 866 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 EN2P19622 333 aaPredicted RBP32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 DSG3P32926 999 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 TFAP4Q01664 338 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 GPR142Q7Z601 462 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 PLEKHH3Q7Z736 793 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 CEP95Q96GE4 821 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 MTMR4Q9NYA4 1195 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 CLIP2Q9UDT6 1046 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 RBBP6Q7Z6E9 1792 aaKnown RBP32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 PLIN4Q96Q06 1357 aa32.8■■■□□ 2.84
ATPAF1-201ENST00000329231 ZMYM6O95789 1325 aa32.79■■■□□ 2.84
ATPAF1-201ENST00000329231 FAM47AQ5JRC9 791 aa32.79■■■□□ 2.84
ATPAF1-201ENST00000329231 CWC27Q6UX04 472 aaKnown RBP32.79■■■□□ 2.84
ATPAF1-201ENST00000329231 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.79■■■□□ 2.84
ATPAF1-201ENST00000329231 TTLL1O95922 423 aa32.78■■■□□ 2.84
ATPAF1-201ENST00000329231 INHAP05111 366 aa32.78■■■□□ 2.84
ATPAF1-201ENST00000329231 CCL5P13501 91 aa32.78■■■□□ 2.84
ATPAF1-201ENST00000329231 TTC22Q5TAA0 569 aa32.78■■■□□ 2.84
ATPAF1-201ENST00000329231 MKL1Q969V6 931 aa32.78■■■□□ 2.84
ATPAF1-201ENST00000329231 SYNPO2Q9UMS6 1093 aa32.78■■■□□ 2.84
ATPAF1-201ENST00000329231 PPP4R3BQ5MIZ7 849 aa32.77■■■□□ 2.84
ATPAF1-201ENST00000329231 RNF208Q9H0X6 261 aa32.77■■■□□ 2.84
ATPAF1-201ENST00000329231 F5H6K3 240 aa32.76■■■□□ 2.83
ATPAF1-201ENST00000329231 XRCC5P13010 732 aaKnown RBP32.76■■■□□ 2.83
ATPAF1-201ENST00000329231 KLRC3Q07444 240 aa32.76■■■□□ 2.83
ATPAF1-201ENST00000329231 FAM83BQ5T0W9 1011 aa32.76■■■□□ 2.83
ATPAF1-201ENST00000329231 WDR78Q5VTH9 848 aa32.76■■■□□ 2.83
ATPAF1-201ENST00000329231 ATG4CQ96DT6 458 aa32.76■■■□□ 2.83
ATPAF1-201ENST00000329231 TSPY2A6NKD2 308 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 HMGCRP04035 888 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 CYP2B6P20813 491 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 MORN1Q5T089 497 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 SAMD1Q6SPF0 538 aaPredicted RBP32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 NKX2-3Q8TAU0 364 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 SPATC1LQ9H0A9 340 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 IVNS1ABPQ9Y6Y0 642 aa32.75■■■□□ 2.83
ATPAF1-201ENST00000329231 ORC4O43929 436 aa32.74■■■□□ 2.83
ATPAF1-201ENST00000329231 NDUFB10O96000 172 aa32.74■■■□□ 2.83
ATPAF1-201ENST00000329231 RGS2P41220 211 aa32.74■■■□□ 2.83
ATPAF1-201ENST00000329231 USP6NLQ92738 828 aa32.74■■■□□ 2.83
ATPAF1-201ENST00000329231 INCENPQ9NQS7 918 aa32.74■■■□□ 2.83
ATPAF1-201ENST00000329231 RANBP6O60518 1105 aaKnown RBP32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms