RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CCDC186Q7Z3E2 898 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 C17orf53Q8N3J3 647 aaPredicted RBP8.68□□□□□ -1.02
IFT88-201ENST00000319980 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
IFT88-201ENST00000319980 COA1Q9GZY4 146 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 ZNF287Q9HBT7 754 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 POLR2DO15514 142 aaKnown RBP8.68□□□□□ -1.02
IFT88-201ENST00000319980 ALDH1B1P30837 517 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 CDK8P49336 464 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 PICALMQ13492 652 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 NPY5RQ15761 445 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
IFT88-201ENST00000319980 KRBA2Q6ZNG9 492 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 PDILTQ8N807 584 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 TMX4Q9H1E5 349 aaPredicted RBP8.68□□□□□ -1.02
IFT88-201ENST00000319980 KCNF1Q9H3M0 494 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 CLIP2Q9UDT6 1046 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 SRPRBQ9Y5M8 271 aaKnown RBP8.68□□□□□ -1.02
IFT88-201ENST00000319980 G3V3G9 751 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 WNT7AO00755 349 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 PDE6BP35913 854 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 NLRP12P59046 1061 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 PFKFB3Q16875 520 aaPredicted RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 USP49Q70CQ1 688 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 METTL16Q86W50 562 aaKnown RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 ZNF622Q969S3 477 aaKnown RBP eCLIP8.67□□□□□ -1.02
IFT88-201ENST00000319980 EYA3Q99504 573 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 TMEM47Q9BQJ4 181 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 CSRNP2Q9H175 543 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 DAGLAQ9Y4D2 1042 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 ROBO3Q96MS0 1386 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 FOXN1O15353 648 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 TPM3P06753 285 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 ZNF174Q15697 407 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 SARM1Q6SZW1 724 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 FAM205AQ6ZU69 1335 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 PIK3AP1Q6ZUJ8 805 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 FOXP4Q8IVH2 680 aaPredicted RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 ANKS1AQ92625 1134 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 GPKOWQ92917 476 aaPredicted RBP eCLIP8.67□□□□□ -1.02
IFT88-201ENST00000319980 TTF2Q9UNY4 1162 aaKnown RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 GAKO14976 1311 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 GOLGA8HP0CJ92 632 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 NT5C2P49902 561 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 NOLC1Q14978 699 aaKnown RBP eCLIP8.67□□□□□ -1.02
IFT88-201ENST00000319980 CCDC178Q5BJE1 867 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 C16orf86Q6ZW13 317 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 CERS5Q8N5B7 392 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 FLAD1Q8NFF5 587 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 TCP11L1Q9NUJ3 509 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 MAD2L2Q9UI95 211 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 TUBE1Q9UJT0 475 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 PCDHA5Q9Y5H7 936 aa8.67□□□□□ -1.02
IFT88-201ENST00000319980 BAZ2BQ9UIF8 2168 aaKnown RBP8.67□□□□□ -1.02
IFT88-201ENST00000319980 ADAMTS3O15072 1205 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 SCNN1DP51172 638 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 DNTTIP2Q5QJE6 756 aaKnown RBP8.66□□□□□ -1.02
IFT88-201ENST00000319980 RASGRP2Q7LDG7 609 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
IFT88-201ENST00000319980 TNFRSF25Q93038 417 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 MASTLQ96GX5 879 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 PYCARDQ9ULZ3 195 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 R3HCC1Q9Y3T6 440 aaKnown RBP8.66□□□□□ -1.02
IFT88-201ENST00000319980 CYTH3O43739 400 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 GNAQP50148 359 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 LRMPQ12912 555 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 GRM4Q14833 912 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 TTC38Q5R3I4 469 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 EPSTI1Q96J88 318 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 CPVLQ9H3G5 476 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
IFT88-201ENST00000319980 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
IFT88-201ENST00000319980 PTGDRQ13258 359 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 CEP95Q96GE4 821 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 MRFAP1L1Q96HT8 127 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 BPIFA3Q9BQP9 254 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 HOOK1Q9UJC3 728 aaKnown RBP8.65□□□□□ -1.02
IFT88-201ENST00000319980 KIF13BQ9NQT8 1826 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 KLRF2D3W0D1 207 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
IFT88-201ENST00000319980 MCM7P33993 719 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 MDM2Q00987 491 aaPredicted RBP8.65□□□□□ -1.02
IFT88-201ENST00000319980 POSTNQ15063 836 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 SLC35G1Q2M3R5 365 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 CCDC144BQ3MJ40 725 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 HEATR3Q7Z4Q2 680 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 FILIP1Q7Z7B0 1213 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 GRAMD1CQ8IYS0 662 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 KIAA1524Q8TCG1 905 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 RASGRP4Q8TDF6 673 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 DBNDD1Q9H9R9 158 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms