RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 HHIPL2Q6UWX4 724 aa15.95■□□□□ 0.14
VAMP2-201ENST00000316509 CCDC148Q8NFR7 591 aa15.95■□□□□ 0.14
VAMP2-201ENST00000316509 MYO3BQ8WXR4 1341 aa15.95■□□□□ 0.14
VAMP2-201ENST00000316509 NPY5RQ15761 445 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 PODNQ7Z5L7 613 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 DRC7Q8IY82 874 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 DAGLBQ8NCG7 672 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 SHISA4Q96DD7 197 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 TMEM47Q9BQJ4 181 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 MAD2L2Q9UI95 211 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 DAGLAQ9Y4D2 1042 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 MMP10P09238 476 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 TOP1P11387 765 aaKnown RBP15.94■□□□□ 0.14
VAMP2-201ENST00000316509 LONRF3Q496Y0 759 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 NT5DC1Q5TFE4 455 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 OLFM4Q6UX06 510 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 SWAP70Q9UH65 585 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 MYH6P13533 1939 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 ANKRD31Q8N7Z5 1873 aa15.94■□□□□ 0.14
VAMP2-201ENST00000316509 MDM2Q00987 491 aaPredicted RBP15.93■□□□□ 0.14
VAMP2-201ENST00000316509 TTC38Q5R3I4 469 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 CCDC12Q8WUD4 166 aaPredicted RBP15.93■□□□□ 0.14
VAMP2-201ENST00000316509 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 SAP30BPQ9UHR5 308 aaKnown RBP15.93■□□□□ 0.14
VAMP2-201ENST00000316509 DACH1Q9UI36 760 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 PCDHA4Q9UN74 947 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 G3V3G9 751 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 POTEAQ6S8J7 498 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 BLIDQ8IZY5 108 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 AOPEPQ8N6M6 819 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 CLIP2Q9UDT6 1046 aa15.93■□□□□ 0.14
VAMP2-201ENST00000316509 USP17L3A6NCW0 530 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 USP17L4A6NCW7 530 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 RIMBP2O15034 1052 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 ATP2C1P98194 919 aaPredicted RBP15.92■□□□□ 0.14
VAMP2-201ENST00000316509 HDLBPQ00341 1268 aaKnown RBP15.92■□□□□ 0.14
VAMP2-201ENST00000316509 NOLC1Q14978 699 aaKnown RBP eCLIP15.92■□□□□ 0.145e-7■■□□□ 14
VAMP2-201ENST00000316509 DPCR1Q3MIW9 517 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 ARL6IP4Q66PJ3 421 aaKnown RBP15.92■□□□□ 0.14
VAMP2-201ENST00000316509 USP17L1Q7RTZ2 530 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 SPC24Q8NBT2 197 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 TTC12Q9H892 705 aaPredicted RBP15.92■□□□□ 0.14
VAMP2-201ENST00000316509 SPTLC3Q9NUV7 552 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 IMPACTQ9P2X3 320 aa15.92■□□□□ 0.14
VAMP2-201ENST00000316509 DDX60LQ5H9U9 1706 aaKnown RBP15.92■□□□□ 0.14
VAMP2-201ENST00000316509 METTL16Q86W50 562 aaKnown RBP15.92■□□□□ 0.14
VAMP2-201ENST00000316509 QSER1Q2KHR3 1735 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 C10orf71Q711Q0 1435 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 H0YIN7 160 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 hCG_1984214I3L0E3 225 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 SARSP49591 514 aaKnown RBP15.91■□□□□ 0.14
VAMP2-201ENST00000316509 GABPAQ06546 454 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 POSTNQ15063 836 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 CCDC186Q7Z3E2 898 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 ZNF713Q8N859 430 aaPredicted RBP15.91■□□□□ 0.14
VAMP2-201ENST00000316509 MLKLQ8NB16 471 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 KIAA1524Q8TCG1 905 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 CSRNP2Q9H175 543 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 STX8Q9UNK0 236 aa15.91■□□□□ 0.14
VAMP2-201ENST00000316509 TTF2Q9UNY4 1162 aaKnown RBP15.91■□□□□ 0.14
VAMP2-201ENST00000316509 POLR2DO15514 142 aaKnown RBP15.9■□□□□ 0.14
VAMP2-201ENST00000316509 SMC2O95347 1197 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 PARP1P09874 1014 aaKnown RBP15.9■□□□□ 0.14
VAMP2-201ENST00000316509 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 BARHL2Q9NY43 387 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 hCG_1642624A0A1W2PR95 340 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 GSDMDP57764 484 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 TEKT1Q969V4 418 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 PCDHA5Q9Y5H7 936 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 SNED1Q8TER0 1413 aa15.9■□□□□ 0.14
VAMP2-201ENST00000316509 TNS1Q9HBL0 1735 aaKnown RBP15.9■□□□□ 0.14
VAMP2-201ENST00000316509 KLRF2D3W0D1 207 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
VAMP2-201ENST00000316509 ATP2B1P20020 1258 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 PNOCQ13519 176 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 EARS2Q5JPH6 523 aaKnown RBP15.89■□□□□ 0.13
VAMP2-201ENST00000316509 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 SLC44A5Q8NCS7 719 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 SPATA20Q8TB22 786 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 ERCC4Q92889 916 aaPredicted RBP15.89■□□□□ 0.13
VAMP2-201ENST00000316509 SMARCE1Q969G3 411 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 ZNF830Q96NB3 372 aaPredicted RBP15.89■□□□□ 0.13
VAMP2-201ENST00000316509 USP40Q9NVE5 1235 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 SERTAD1Q9UHV2 236 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 M0R2N6 131 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 LAD1O00515 517 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 ACTN4O43707 911 aaKnown RBP15.89■□□□□ 0.13
VAMP2-201ENST00000316509 TPM2P07951 284 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 SLFN14P0C7P3 912 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 MYL5Q02045 173 aa15.89■□□□□ 0.13
VAMP2-201ENST00000316509 NCAPHQ15003 741 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms