RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ERICH4A6NGS2 130 aa11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 CBFA2T2O43439 604 aa11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 RANBP6O60518 1105 aaKnown RBP11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 ZNF202O95125 648 aa11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 ZBTB7AO95365 584 aa11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 FANCCQ00597 558 aa11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 C15orf52Q6ZUT6 534 aaKnown RBP11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 CRNKL1Q9BZJ0 848 aaKnown RBP11.77□□□□□ -0.53
APOBEC3F-201ENST00000308521 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 PNMA6AP0CW24 399 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 USP5P45974 858 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 ARHGAP29Q52LW3 1261 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 CMTR1Q8N1G2 835 aaKnown RBP11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 FBXO18Q8NFZ0 1043 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 C8orf76Q96K31 380 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 CHD4Q14839 1912 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 UBE2Q2LH0YL09 131 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 GPS2Q13227 327 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 TRIM65Q6PJ69 517 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 TUBE1Q9UJT0 475 aa11.76□□□□□ -0.53
APOBEC3F-201ENST00000308521 C21orf2O43822 256 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 NMT2O60551 498 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 CDC27P30260 824 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 BTDP43251 543 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 SCNN1DP51172 638 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 HOMER1Q86YM7 354 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 LRRN4CLQ8ND94 238 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 UBXN4Q92575 508 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 DYNLL2Q96FJ2 89 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 CPLX1O14810 134 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 COL11A2P13942 1736 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 TMCO3Q6UWJ1 677 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 PHKBQ93100 1093 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 KRT23Q9C075 422 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 HSD3B7Q9H2F3 369 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
APOBEC3F-201ENST00000308521 FAM237AA0A1B0GTK4 181 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 KIF1CO43896 1103 aaKnown RBP11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 TADA3O75528 432 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 METAP2P50579 478 aaKnown RBP eCLIP11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 REXO1L1PQ8IX06 675 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 CNNM2Q9H8M5 875 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 WDR19Q8NEZ3 1342 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 SLX4Q8IY92 1834 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 ZSCAN12O43309 604 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 PFKFB1P16118 471 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 ST7Q9NRC1 585 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
APOBEC3F-201ENST00000308521 PLCD1P51178 756 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 VSTM4Q8IW00 320 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 SLC44A5Q8NCS7 719 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 UBXN6Q9BZV1 441 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 HPSEQ9Y251 543 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 SLC12A7Q9Y666 1083 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 BIN1O00499 593 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 ZBTB43O43298 467 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 BAG3O95817 575 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 POLR3DP05423 398 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 UBASH3AP57075 661 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 MYL5Q02045 173 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 KIF23Q02241 960 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 WTAPQ15007 396 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 AOC3Q16853 763 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 MNS1Q8NEH6 495 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 TMEM87BQ96K49 555 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 UBAC1Q9BSL1 405 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 RNF41Q9H4P4 317 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 GOLGA6L9A6NEM1 432 aa11.73□□□□□ -0.53
APOBEC3F-201ENST00000308521 PPP6R2O75170 966 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms